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Gene Symbol
HSPA1L
Assay Reference Genome
Location

Chr.6:31811001 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00612977_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 3305

Gene Name:

 heat shock protein family A (Hsp70) member 1 like

Gene Aliases:

 HSP70-1L, HSP70-HOM, HSP70T, hum70t

Location:

 Chr.6:31809619-31815058 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HSPA1L NM_005527.3 2 1155 NP_005518.3
AK223386.1 2 1129 BAD97106.1
AK295416.1 2 1389
AK302179.1 2 1124
AK315227.1 2 1065
BC034483.1 2 1132 AAH34483.1
D85730.1 2 1107 BAA32521.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv823503 Chr.6:31810492 - 31811959 on Build GRCh38 Loss HSPA1L
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LY6G6C VARS HLA-DRB5 GPANK1 NEU1 BAG6 TNF SNORA38 C6orf10 HCG23 AGPAT1 DDX39B CSNK2B PPT2-EGFL8 MIR6833 HCG26 LY6G6F CYP21A1P HSPA1A C6orf25 LY6G6E LTB AGER PBX2 MICB LOC100287329 LY6G5B HLA-DRB6 NELFE TNXA MIR6721 SKIV2L C4A LOC102725068 NOTCH4 ATF6B PPT2 PRRT1 HLA-DRA MSH5-SAPCD1 LST1 ATP6V1G2 HSPA1L CFB C2-AS1 MIR4646 SNORD52 HLA-DRB1 DXO MCCD1 C2 GPSM3 VWA7 SAPCD1 EHMT2 HCP5 LSM2 RNF5 CYP21A2 SAPCD1-AS1 NFKBIL1 LY6G5C MSH5 ZBTB12 SNORD117 C6orf47 EGFL8 MIR6832 AIF1 FKBPL TNXB STK19 SNORD84 C6orf48 HSPA1B DDX39B-AS1 LY6G6D NCR3 BTNL2 LOC100507547 PRRC2A C4B MIR1236 DDAH2 ABHD16A LTA CLIC1 SLC44A4 APOM LOC101929163 SNORD48 ATP6V1G2-DDX39B
nsv823502 Chr.6:31809880 - 31811846 on Build GRCh38 Loss HSPA1L
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion VARS VPS52 LOC100294145 HLA-DRB5 BAG6 TNF C6orf10 HCG23 HLA-DPA1 DDX39B HLA-DMA RPS18 HCG25 HCG26 LY6G6F ZBTB22 CYP21A1P LY6G6E LTB KIFC1 SYNGAP1 MIR219A1 NELFE TNXA HSD17B8 MIR6721 CUTA LOC102725068 NOTCH4 HLA-DPB1 ZBTB9 HLA-DRA PSMB8 TAP2 LST1 ATP6V1G2 CFB MIR4646 MCCD1 BRD2 VWA7 SAPCD1 EHMT2 HCP5 RNF5 CYP21A2 PPP1R2P1 HLA-DQA1 ZBTB12 TAP1 C6orf47 MIR6832 STK19 SNORD84 C6orf48 HSPA1B HLA-DQB1 DDX39B-AS1 LY6G6D PRRC2A C4B MIR1236 DDAH2 APOM PSMB8-AS1 SNORD48 LY6G6C GPANK1 PSMB9 NEU1 PHF1 RXRB SLC39A7 SNORA38 HLA-DQA2 AGPAT1 CSNK2B PPT2-EGFL8 MIR6833 HSPA1A C6orf25 MIR6834 AGER PBX2 MICB LOC100287329 LY6G5B HLA-DRB6 HLA-DQB1-AS1 HLA-DMB PFDN6 HLA-DOB SKIV2L C4A ATF6B MIR6873 PPT2 PRRT1 RGL2 MSH5-SAPCD1 HSPA1L C2-AS1 SNORD52 HLA-DRB1 DXO C2 GPSM3 RING1 MIR3135B LSM2 SAPCD1-AS1 NFKBIL1 LY6G5C MSH5 MIR5004 SNORD117 EGFL8 DAXX AIF1 FKBPL COL11A2 TNXB NCR3 BTNL2 LOC100507547 HLA-DPB2 ABHD16A LTA CLIC1 HCG24 TAPBP SLC44A4 HLA-DOA WDR46 HLA-DQB2 LOC101929163 ATP6V1G2-DDX39B B3GALT4
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LY6G6C VARS GPANK1 NEU1 BAG6 TNF SNORA38 DDX39B CSNK2B HCG26 LY6G6F CYP21A1P HSPA1A C6orf25 LY6G6E LTB MICB LOC100287329 LY6G5B NELFE TNXA SKIV2L C4A LOC102725068 HLA-B MSH5-SAPCD1 MIR6891 LST1 ATP6V1G2 HSPA1L CFB C2-AS1 MIR4646 SNORD52 DXO MCCD1 C2 MICA VWA7 SAPCD1 EHMT2 HCP5 LSM2 CYP21A2 SAPCD1-AS1 NFKBIL1 LY6G5C MSH5 ZBTB12 SNORD117 C6orf47 MIR6832 AIF1 TNXB STK19 SNORD84 C6orf48 HSPA1B DDX39B-AS1 LY6G6D NCR3 PRRC2A C4B MIR1236 DDAH2 ABHD16A LTA CLIC1 SLC44A4 APOM SNORD48 ATP6V1G2-DDX39B
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion VARS VPS52 LOC100294145 HLA-DRB5 BAG6 TNF C6orf10 HCG23 HLA-DPA1 DDX39B HLA-DMA RPS18 HCG25 HCG26 LY6G6F ZBTB22 CYP21A1P LY6G6E LTB KIFC1 SYNGAP1 MIR219A1 NELFE TNXA HSD17B8 MIR6721 CUTA LOC102725068 NOTCH4 HLA-DPB1 ZBTB9 HLA-DRA PSMB8 TAP2 LST1 ATP6V1G2 CFB MIR4646 MCCD1 BRD2 VWA7 SAPCD1 EHMT2 HCP5 RNF5 CYP21A2 PPP1R2P1 HLA-DQA1 ZBTB12 TAP1 C6orf47 MIR6832 STK19 SNORD84 C6orf48 HSPA1B HLA-DQB1 DDX39B-AS1 LY6G6D PRRC2A C4B MIR1236 DDAH2 APOM PSMB8-AS1 SNORD48 LY6G6C GPANK1 PSMB9 NEU1 PHF1 RXRB SLC39A7 SNORA38 HLA-DQA2 AGPAT1 CSNK2B PPT2-EGFL8 MIR6833 HSPA1A C6orf25 MIR6834 AGER PBX2 MICB LOC100287329 LY6G5B HLA-DRB6 HLA-DQB1-AS1 HLA-DMB PFDN6 HLA-DOB SKIV2L C4A ATF6B MIR6873 PPT2 PRRT1 RGL2 MSH5-SAPCD1 HSPA1L C2-AS1 SNORD52 HLA-DRB1 DXO C2 GPSM3 RING1 MIR3135B LSM2 SAPCD1-AS1 NFKBIL1 LY6G5C MSH5 MIR5004 SNORD117 EGFL8 DAXX AIF1 FKBPL COL11A2 TNXB NCR3 BTNL2 LOC100507547 HLA-DPB2 ABHD16A LTA CLIC1 HCG24 TAPBP SLC44A4 HLA-DOA WDR46 HLA-DQB2 LOC101929163 ATP6V1G2-DDX39B B3GALT4
dgv10461n54 Chr.6:31810495 - 31896527 on Build GRCh38 Loss EHMT2 HSPA1L NEU1 SLC44A4 C6orf48 SNORD52 HSPA1B SNORD48 HSPA1A
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LY6G6C VARS GPANK1 NEU1 BAG6 TNF SNORA38 C6orf10 HCG23 AGPAT1 DDX39B CSNK2B PPT2-EGFL8 MIR6833 HCG26 LY6G6F CYP21A1P HSPA1A C6orf25 LY6G6E LTB AGER PBX2 MICB LOC100287329 LY6G5B NELFE TNXA MIR6721 SKIV2L C4A LOC102725068 NOTCH4 HLA-B ATF6B PPT2 PRRT1 HLA-DRA MSH5-SAPCD1 MIR6891 LST1 ATP6V1G2 HSPA1L CFB C2-AS1 MIR4646 SNORD52 DXO MCCD1 C2 MICA GPSM3 VWA7 SAPCD1 EHMT2 HCP5 LSM2 RNF5 CYP21A2 SAPCD1-AS1 NFKBIL1 LY6G5C MSH5 ZBTB12 SNORD117 C6orf47 EGFL8 MIR6832 AIF1 FKBPL TNXB STK19 SNORD84 C6orf48 HSPA1B DDX39B-AS1 LY6G6D NCR3 BTNL2 LOC100507547 PRRC2A C4B MIR1236 DDAH2 ABHD16A LTA CLIC1 SLC44A4 APOM LOC101929163 SNORD48 ATP6V1G2-DDX39B

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