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Gene Symbol
HSPA1L
Assay Reference Genome
Location

Chr.6:31811001 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00612977_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 3305

Gene Name:

 heat shock protein family A (Hsp70) member 1 like

Gene Aliases:

 HSP70-1L, HSP70-HOM, HSP70T, hum70t

Location:

 Chr.6:31809619-31815058 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HSPA1L NM_005527.3 2 1155 NP_005518.3
AK223386.1 2 1129 BAD97106.1
AK295416.1 2 1389
AK302179.1 2 1124
AK315227.1 2 1065
BC034483.1 2 1132 AAH34483.1
D85730.1 2 1107 BAA32521.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv823503 Chr.6:31810492 - 31811959 on Build GRCh38 Loss HSPA1L
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion MCCD1 SNORA38 PRRT1 TNF MIR6832 CLIC1 ATP6V1G2-DDX39B NCR3 NELFE LOC100507547 DDAH2 LY6G6E CSNK2B LTA GPANK1 CFB ATP6V1G2 C4B C6orf10 SAPCD1 DXO MSH5-SAPCD1 AIF1 HCG23 VARS EGFL8 LOC100287329 LY6G6F LY6G5B NEU1 MIR1236 PBX2 MIR4646 HSPA1L NFKBIL1 DDX39B C6orf47 AGER LTB HSPA1A MICB CYP21A2 AGPAT1 SAPCD1-AS1 ABHD16A FKBPL MSH5 TNXB SLC44A4 LY6G6C C2 PPT2-EGFL8 SNORD52 DDX39B-AS1 C2-AS1 HSPA1B HLA-DRB6 LY6G6D HCP5 PPT2 BTNL2 ATF6B HLA-DRB5 LOC102725068 LST1 RNF5 ZBTB12 LOC101929163 C4A C6orf48 C6orf25 HLA-DRA NOTCH4 HCG26 BAG6 SNORD48 SKIV2L LY6G5C MIR6833 PRRC2A SNORD117 HLA-DRB1 APOM VWA7 MIR6721 GPSM3 STK19 EHMT2 TNXA LSM2 CYP21A1P SNORD84
nsv823502 Chr.6:31809880 - 31811846 on Build GRCh38 Loss HSPA1L
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss MCCD1 SNORA38 TNF MIR6832 CLIC1 ATP6V1G2-DDX39B NCR3 NELFE DDAH2 LY6G6E CSNK2B LTA GPANK1 CFB ATP6V1G2 C4B SAPCD1 DXO MSH5-SAPCD1 AIF1 VARS LOC100287329 LY6G6F LY6G5B NEU1 MIR1236 MIR4646 HSPA1L NFKBIL1 DDX39B C6orf47 LTB HSPA1A MICB CYP21A2 SAPCD1-AS1 ABHD16A MSH5 TNXB SLC44A4 LY6G6C C2 SNORD52 DDX39B-AS1 C2-AS1 HSPA1B HLA-B LY6G6D HCP5 MICA LOC102725068 LST1 ZBTB12 C4A C6orf48 C6orf25 HCG26 BAG6 SNORD48 SKIV2L LY6G5C PRRC2A SNORD117 APOM VWA7 MIR6891 STK19 EHMT2 TNXA LSM2 CYP21A1P SNORD84
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion COL11A2 MIR6873 SNORA38 PRRT1 TNF HLA-DQB1 KIFC1 HLA-DQB2 ZBTB9 NELFE LY6G6E LTA MIR219A1 PFDN6 ATP6V1G2 ZBTB22 B3GALT4 SAPCD1 DXO HCG23 VARS LY6G6F NEU1 TAP1 MIR1236 PBX2 TAPBP HSPA1L AGER MICB CYP21A2 ABHD16A TNXB C2 RGL2 C2-AS1 HSPA1B HLA-DPA1 MIR3135B HCG24 HLA-DRB6 LY6G6D PSMB8 RXRB BTNL2 HCG25 HLA-DRB5 LOC102725068 LST1 RNF5 ZBTB12 C6orf48 C6orf25 HCG26 PSMB8-AS1 SKIV2L LY6G5C MIR6833 PRRC2A SNORD117 MIR6721 GPSM3 STK19 CUTA EHMT2 VPS52 LSM2 CYP21A1P SNORD84 HLA-DOA HLA-DQB1-AS1 MCCD1 SYNGAP1 MIR6832 CLIC1 ATP6V1G2-DDX39B WDR46 NCR3 LOC100507547 DDAH2 CSNK2B HLA-DQA1 GPANK1 CFB SLC39A7 C4B C6orf10 HLA-DMB MSH5-SAPCD1 AIF1 HSD17B8 EGFL8 LOC100287329 LY6G5B MIR4646 NFKBIL1 DDX39B C6orf47 LTB HSPA1A AGPAT1 SAPCD1-AS1 FKBPL RING1 MSH5 SLC44A4 LY6G6C PPT2-EGFL8 HLA-DOB SNORD52 DDX39B-AS1 MIR5004 BRD2 HLA-DPB2 HLA-DQA2 PHF1 MIR6834 HLA-DMA PSMB9 HCP5 PPT2 ATF6B HLA-DPB1 RPS18 LOC101929163 C4A LOC100294145 HLA-DRA NOTCH4 BAG6 SNORD48 TAP2 HLA-DRB1 APOM VWA7 TNXA DAXX PPP1R2P1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion COL11A2 MIR6873 SNORA38 PRRT1 TNF HLA-DQB1 KIFC1 HLA-DQB2 ZBTB9 NELFE LY6G6E LTA MIR219A1 PFDN6 ATP6V1G2 ZBTB22 B3GALT4 SAPCD1 DXO HCG23 VARS LY6G6F NEU1 TAP1 MIR1236 PBX2 TAPBP HSPA1L AGER MICB CYP21A2 ABHD16A TNXB C2 RGL2 C2-AS1 HSPA1B HLA-DPA1 MIR3135B HCG24 HLA-DRB6 LY6G6D PSMB8 RXRB BTNL2 HCG25 HLA-DRB5 LOC102725068 LST1 RNF5 ZBTB12 C6orf48 C6orf25 HCG26 PSMB8-AS1 SKIV2L LY6G5C MIR6833 PRRC2A SNORD117 MIR6721 GPSM3 STK19 CUTA EHMT2 VPS52 LSM2 CYP21A1P SNORD84 HLA-DOA HLA-DQB1-AS1 MCCD1 SYNGAP1 MIR6832 CLIC1 ATP6V1G2-DDX39B WDR46 NCR3 LOC100507547 DDAH2 CSNK2B HLA-DQA1 GPANK1 CFB SLC39A7 C4B C6orf10 HLA-DMB MSH5-SAPCD1 AIF1 HSD17B8 EGFL8 LOC100287329 LY6G5B MIR4646 NFKBIL1 DDX39B C6orf47 LTB HSPA1A AGPAT1 SAPCD1-AS1 FKBPL RING1 MSH5 SLC44A4 LY6G6C PPT2-EGFL8 HLA-DOB SNORD52 DDX39B-AS1 MIR5004 BRD2 HLA-DPB2 HLA-DQA2 PHF1 MIR6834 HLA-DMA PSMB9 HCP5 PPT2 ATF6B HLA-DPB1 RPS18 LOC101929163 C4A LOC100294145 HLA-DRA NOTCH4 BAG6 SNORD48 TAP2 HLA-DRB1 APOM VWA7 TNXA DAXX PPP1R2P1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss MCCD1 SNORA38 PRRT1 TNF MIR6832 CLIC1 ATP6V1G2-DDX39B NCR3 NELFE LOC100507547 DDAH2 LY6G6E CSNK2B LTA GPANK1 CFB ATP6V1G2 C4B C6orf10 SAPCD1 DXO MSH5-SAPCD1 AIF1 HCG23 VARS EGFL8 LOC100287329 LY6G6F LY6G5B NEU1 MIR1236 PBX2 MIR4646 HSPA1L NFKBIL1 DDX39B C6orf47 AGER LTB HSPA1A MICB CYP21A2 AGPAT1 SAPCD1-AS1 ABHD16A FKBPL MSH5 TNXB SLC44A4 LY6G6C C2 PPT2-EGFL8 SNORD52 DDX39B-AS1 C2-AS1 HSPA1B HLA-B LY6G6D HCP5 PPT2 BTNL2 MICA ATF6B LOC102725068 LST1 RNF5 ZBTB12 LOC101929163 C4A C6orf48 C6orf25 HLA-DRA NOTCH4 HCG26 BAG6 SNORD48 SKIV2L LY6G5C MIR6833 PRRC2A SNORD117 APOM VWA7 MIR6721 GPSM3 MIR6891 STK19 EHMT2 TNXA LSM2 CYP21A1P SNORD84
dgv10461n54 Chr.6:31810495 - 31896527 on Build GRCh38 Loss NEU1 SNORD48 SLC44A4 HSPA1L SNORD52 EHMT2 HSPA1A C6orf48 HSPA1B

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