Hs00619913_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67879743 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Overlaps Exon 15 - Intron 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4			NP_055144.3
	AK128582.1
	AK291049.1
	AK302563.1
	BC043616.1			AAH43616.1
	BC053598.1			AAH53598.1
	BC064567.1			AAH64567.1
	L26339.1			AAA21833.1
	U17474.1			AAB51444.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	CARMIL2 PSKH1 KCTD19 HSF4 NOL3 E2F4 TMEM208 LOC100505942 ENKD1 PSMB10 RANBP10 LOC107984813 DPEP3 ACD DUS2 FBXL8 EXOC3L1 FAM65A DDX28 SLC9A5 NRN1L PARD6A MIR328 DPEP2 ATP6V0D1 PLEKHG4 CENPT LRRC36 TSNAXIP1 NUTF2 LOC100131303 TPPP3 EDC4 ZDHHC1 SLC12A4 HSD11B2 C16orf86 GFOD2 ELMO3 LRRC29 FHOD1 KIAA0895L CTCF AGRP THAP11 TRADD LCAT CTRL LOC105369155
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	NUTF2 EDC4 NRN1L PSKH1
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	CARMIL2 PSKH1 KCTD19 HSF4 NOL3 E2F4 TMEM208 LOC100505942 ENKD1 PSMB10 RANBP10 LOC107984813 DPEP3 ACD DUS2 FBXL8 EXOC3L1 C16orf70 FAM65A DDX28 SLC9A5 NRN1L PARD6A MIR328 DPEP2 ATP6V0D1 PLEKHG4 CENPT LRRC36 TSNAXIP1 NUTF2 LOC100131303 B3GNT9 TPPP3 EDC4 ZDHHC1 SLC12A4 HSD11B2 C16orf86 GFOD2 ELMO3 LRRC29 FHOD1 KIAA0895L CTCF AGRP THAP11 TRADD LCAT CTRL LOC105369155

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding