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See other TUBGCP2 CNV Assays ›
Gene Symbol
TUBGCP2
Assay Reference Genome
Location

Chr.10:133293616 on build GRCh38
Cytoband
10q26.3
Assay ID Hs00633655_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10844

Gene Name:

 tubulin gamma complex associated protein 2

Gene Aliases:

 GCP-2, GCP2, Grip103, SPBC97, Spc97p, h103p, hGCP2, hSpc97

Location:

 Chr.10:133278630-133312337 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TUBGCP2 NM_001256617.1 NP_001243546.1
NM_001256618.1 NP_001243547.1
NM_006659.3 NP_006650.1
NR_046330.1
AF042379.1 AAC39728.1
AK092113.1
AK223586.1 BAD97306.1
AK297251.1
AK299564.1
AK314520.1
BC093770.1 AAH93770.1
BC111957.1 AAI11958.1
BC143247.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv470980 Chr.10:133186655 - 133409514 on Build GRCh38 Loss FUOM CALY MIR202 VENTX TUBGCP2 ADAM8 ECHS1 ZNF511 PAOX UTF1 MTG1 MIR3944 MIR202HG PRAP1 KNDC1
esv2759793 Chr.10:133030918 - 133619181 on Build GRCh38 Gain+Loss SPRNP1 ADGRA1 FUOM CALY MIR202 ADGRA1-AS1 VENTX SPRN TUBGCP2 ADAM8 SCART1 ECHS1 ZNF511 PAOX UTF1 MTG1 MIR3944 CYP2E1 MIR202HG SYCE1 PRAP1 KNDC1
nsv428243 Chr.10:133245214 - 133767422 on Build GRCh38 Gain SPRNP1 FUOM CALY MIR202 SPRN TUBGCP2 ADAM8 SCART1 ECHS1 ZNF511 FRG2B PAOX MTG1 MIR3944 CYP2E1 MIR202HG SYCE1 PRAP1
nsv1159786 Chr.10:133242961 - 133339792 on Build GRCh38 Deletion ADAM8 ZNF511 CALY MIR202 MIR202HG TUBGCP2
esv3891901 Chr.10:133272876 - 133336528 on Build GRCh38 Loss ADAM8 ZNF511 CALY TUBGCP2
nsv832038 Chr.10:133143596 - 133320747 on Build GRCh38 Gain+Loss ADAM8 ZNF511 MIR202 VENTX UTF1 MIR202HG KNDC1 TUBGCP2
dgv2e196 Chr.10:133189913 - 133450541 on Build GRCh38 Duplication FUOM CALY MIR202 VENTX SPRN TUBGCP2 ADAM8 ECHS1 ZNF511 PAOX UTF1 MTG1 MIR3944 MIR202HG PRAP1 KNDC1
nsv1040726 Chr.10:133282503 - 133353665 on Build GRCh38 Loss FUOM ZNF511 CALY PRAP1 TUBGCP2
nsv1037772 Chr.10:133263092 - 133403671 on Build GRCh38 Gain ADAM8 ECHS1 FUOM ZNF511 CALY PAOX MTG1 MIR3944 PRAP1 TUBGCP2
nsv552587 Chr.10:133255089 - 133303529 on Build GRCh38 Loss ADAM8 TUBGCP2
nsv1159785 Chr.10:133203815 - 133305981 on Build GRCh38 Deletion ADAM8 MIR202 VENTX UTF1 MIR202HG KNDC1 TUBGCP2
esv3625030 Chr.10:133200862 - 133379742 on Build GRCh38 Gain FUOM CALY MIR202 VENTX TUBGCP2 ADAM8 ECHS1 ZNF511 PAOX UTF1 MIR3944 MIR202HG PRAP1 KNDC1
esv2750853 Chr.10:133266358 - 133621047 on Build GRCh38 Gain SPRNP1 FUOM CALY SPRN TUBGCP2 ADAM8 SCART1 ECHS1 ZNF511 PAOX MTG1 MIR3944 CYP2E1 SYCE1 PRAP1
nsv528260 Chr.10:132859348 - 133620799 on Build GRCh38 Loss ADGRA1 FUOM LINC01168 VENTX TUBGCP2 LINC01166 PAOX MTG1 MIR3944 KNDC1 SPRNP1 CALY MIR202 CFAP46 ADGRA1-AS1 SPRN ADAM8 SCART1 LINC01167 ECHS1 ZNF511 UTF1 CYP2E1 MIR202HG SYCE1 PRAP1
dgv3e196 Chr.10:133266297 - 133450541 on Build GRCh38 Duplication ADAM8 ECHS1 FUOM ZNF511 CALY PAOX MTG1 MIR3944 PRAP1 SPRN TUBGCP2
nsv832036 Chr.10:133089509 - 133368232 on Build GRCh38 Loss ADGRA1 FUOM CALY MIR202 VENTX TUBGCP2 ADAM8 ECHS1 ZNF511 UTF1 MIR202HG PRAP1 KNDC1
dgv1475n54 Chr.10:133257500 - 133333210 on Build GRCh38 Loss ADAM8 ZNF511 CALY TUBGCP2

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More Information


Additional Information:

For this assay, SNP(s) [rs138806049] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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