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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1632217 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00662348_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
BC137172.1
BC137173.1
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss MIR3177 CRAMP1 NUBP2 IFT140 NME3 MAPK8IP3 MRPS34 HN1L HAGH EME2 IGFALS SPSB3 LOC105371046
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR6511B1 MIR6767 CLCN7 MEIOB NTHL1 TPSAB1 SLC9A3R2 LOC106660606 TSR3 UNKL RAB26 LOC100287175 IFT140 DECR2 LOC652276 NME3 TPSB2 FBXL16 TBC1D24 MRPL28 LOC100134368 SOX8 RGS11 TMEM204 LOC105371038 MIR3176 PKD1 MIR4516 RNF151 PDPK1 RHBDL1 RPL3L NPRL3 CCNF NPW FAHD1 CACNA1H UBE2I RPS2 LOC105371046 ECI1 MIR4717 MCRIP2 LOC105371184 E4F1 MPG AXIN1 ABCA3 RNPS1 TBL3 PDIA2 C16orf59 MIR3677 HAGHL SYNGR3 TSC2 CHTF18 CCDC154 CASKIN1 EME2 NARFL SPSB3 LOC105371049 MIR3177 MIR5587 HBQ1 NTN3 PGP RAB40C MIR6859-4 MAPK8IP3 SSTR5-AS1 MRPS34 SNORA78 MSLN STUB1 PTX4 GNPTG WDR90 HBZ PIGQ LMF1 SNORA64 LINC00235 JMJD8 HS3ST6 MIR940 MIR3178 TPSD1 POLR3K LOC729652 METRN MIR1225 PRSS29P PRSS27 TPSG1 LOC105371045 SNORA10 WASIR2 LOC107984876 RHBDF1 NOXO1 SNHG19 HBA2 LMF1-AS1 AMDHD2 C1QTNF8 BRICD5 ZNF598 RPUSD1 MIR6768 BAIAP3 FAM234A MIR3180-5 HN1L MIR662 NDUFB10 LUC7L SNRNP25 ATP6V0C SNORD60 METTL26 GFER HBM LOC101929280 MLST8 NHLRC4 CCDC78 FLJ42627 RHOT2 TMEM8A FAM173A NUBP2 CEMP1 ERVK13-1 LOC107987233 PRR35 NME4 SNHG9 CAPN15 C16orf91 WDR24 LINC00254 MSRB1 WFIKKN1 HAGH LOC105371047 ARHGDIG TELO2 ABCA17P PRR25 HBA1 KCTD5 CRAMP1 DNASE1L2 TRAF7 GNG13 SSTR5 DDX11L10 RAB11FIP3 IGFALS RPL23AP5
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss MIR3177 MEIOB CRAMP1 NUBP2 IFT140 TMEM204 NME3 MAPK8IP3 MRPS34 HN1L FAHD1 HAGH LOC105371047 EME2 IGFALS TELO2 SPSB3 LOC105371046
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss HN1L CRAMP1 IFT140 LOC105371046
nsv833118 Chr.16:1550716 - 1711581 on Build GRCh38 Loss HN1L CRAMP1 IFT140 TMEM204 MAPK8IP3 LOC105371046
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain CRAMP1 IFT140 LOC105371046

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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