Hs00664488_cn

• Gene Symbol: PAMR1
• Assay Reference Genome Location: Chr.11:35441532 on build GRCh38
• Cytoband: 11p13

Target Gene Details

• Entrez Gene ID: 25891
• Gene Name: peptidase domain containing associated with muscle regeneration 1
• Gene Aliases: DKFZP586H2123, FP938, RAMP
• Location: Chr.11:35431827-35530300 on Build GRCh38
• Assay Gene Location: Within Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PAMR1	NM_001001991.2	7	1428	NP_001001991.1
	NM_001282675.1	9	1418	NP_001269604.1
	NM_001282676.1	5	1095	NP_001269605.1
	NM_015430.3	8	1479	NP_056245.2
	AF370388.1	6	916	AAQ15224.1
	AK027841.1	8	1079	BAB55404.1
	AK297092.1	9	1419
	AK300185.1	5	680
	AK316188.1	5	667
	AL832391.1	7	994	CAI46203.1
	AY358346.1	7	1007	AAQ88712.1
	BC089434.1	8	1071	AAH89434.1
	BX640676.1	7	1428	CAE45808.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2759819	Chr.11:35297773 - 35458974 on Build GRCh38	Gain	PAMR1 SLC1A2
nsv832120	Chr.11:35255863 - 35468756 on Build GRCh38	Gain	PAMR1 SLC1A2
nsv1042014	Chr.11:34919190 - 37195907 on Build GRCh38	Loss	LOC101928510 COMMD9 MIR1343 TRIM44 PAMR1 RAG2 PDHX PRR5L LOC100507144 SLC1A2 MIR3973 C11orf74 RAG1 CD44 LDLRAD3 FJX1 TRAF6

More Information

Additional Information:

For this assay, SNP(s) [rs113777401] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

protease, serine protease, protein modifying enzyme

Gene Ontology Categories:

Function(s)

calcium ion binding