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See other PNPLA2 CNV Assays ›
Gene Symbol
PNPLA2
Assay Reference Genome
Location

Chr.11:824897 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00680348_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57104

Gene Name:

 patatin like phospholipase domain containing 2

Gene Aliases:

 1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, iPLA2zeta

Location:

 Chr.11:818895-825573 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PNPLA2 NM_020376.3 10 1753 NP_065109.1
XM_006718265.3 9 1901 XP_006718328.1
XM_006718266.3 8 1841 XP_006718329.1
XM_017018028.1 9 1699 XP_016873517.1
AF055000.1 8 1271 AAC09354.1
AJ278475.1 10 1622 CAC01131.1
AJ278476.1 9 1642 CAC01132.1
AL833707.1 4 980
AY203925.1 6 2403 AAP34448.1
BC011958.1 7 1141 AAH11958.1
BC017280.2 10 1752 AAH17280.1
HQ651812.1 10 1753
JF279441.1 10 1753
JF279442.1 10 1753
KF601369.1 10 1753

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain TSPAN4 PNPLA2 LOC171391 AP2A2 CD151 SLC25A22 CEND1 CRACR2B CHID1 RPLP2 PANO1 PDDC1 PIDD1 SNORA52 POLR2L
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC101059906 MUC2 MUC5AC LOC171391 AP2A2 SLC25A22 MIR210 TOLLIP IRF7 CHID1 TOLLIP-AS1 PDDC1 MUC5B PIDD1 LOC101927503 HRAS LRRC56 SIGIRR EPS8L2 CDHR5 TALDO1 DEAF1 TMEM80 MIR6744 TSPAN4 ANO9 PNPLA2 LOC143666 RASSF7 CD151 LMNTD2 CEND1 CRACR2B PHRF1 RPLP2 PANO1 SCT MIR210HG RNH1 MUC6 SNORA52 DRD4 PTDSS2 POLR2L
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC101059906 LOC171391 AP2A2 SLC25A22 MIR210 IRF7 CHID1 PKP3 PDDC1 PIDD1 HRAS LRRC56 SIGIRR EPS8L2 CDHR5 TALDO1 DEAF1 TMEM80 TSPAN4 ANO9 PNPLA2 LOC143666 RASSF7 CD151 LMNTD2 CEND1 CRACR2B PHRF1 B4GALNT4 RPLP2 PANO1 SCT MIR210HG RNH1 SNORA52 DRD4 PTDSS2 POLR2L
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain RPLP2 PANO1 PDDC1 PNPLA2 PIDD1 LOC171391 CD151 SLC25A22 CEND1 CRACR2B SNORA52
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC101059906 LOC171391 SLC25A22 MIR210 IRF7 CHID1 PDDC1 PIDD1 HRAS LRRC56 EPS8L2 CDHR5 TALDO1 DEAF1 TMEM80 TSPAN4 PNPLA2 LOC143666 RASSF7 CD151 LMNTD2 CEND1 CRACR2B PHRF1 RPLP2 PANO1 SCT MIR210HG RNH1 SNORA52 DRD4 PTDSS2 POLR2L
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss TSPAN4 PNPLA2 LOC171391 CD151 SLC25A22 CEND1 CRACR2B CHID1 RPLP2 PANO1 PDDC1 PIDD1 SNORA52 POLR2L
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC101059906 MUC2 MUC5AC LOC171391 AP2A2 SLC25A22 MIR210 TOLLIP IRF7 CHID1 PKP3 PDDC1 MUC5B PIDD1 LOC101927503 HRAS LRRC56 SIGIRR EPS8L2 CDHR5 TALDO1 DEAF1 TMEM80 MIR6744 TSPAN4 ANO9 PNPLA2 LOC143666 RASSF7 CD151 LMNTD2 CEND1 CRACR2B PHRF1 B4GALNT4 RPLP2 PANO1 SCT MIR210HG RNH1 MUC6 SNORA52 DRD4 PTDSS2 POLR2L
dgv1526n54 Chr.11:812533 - 843713 on Build GRCh38 Gain RPLP2 TSPAN4 PNPLA2 CD151 CRACR2B POLR2L
nsv552874 Chr.11:823590 - 843713 on Build GRCh38 Gain TSPAN4 PNPLA2 CD151 CRACR2B POLR2L
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss RPLP2 TSPAN4 PNPLA2 PIDD1 AP2A2 CD151 CRACR2B SNORA52 CHID1 POLR2L
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss TSPAN4 PNPLA2 LOC171391 CD151 SLC25A22 CEND1 CRACR2B CHID1 RPLP2 PANO1 PDDC1 PIDD1 SNORA52 POLR2L
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain TSPAN4 PNPLA2 CD151 CRACR2B CHID1 POLR2L
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion TSPAN4 PNPLA2 LOC171391 CD151 SLC25A22 CEND1 CRACR2B CHID1 RPLP2 PANO1 PDDC1 PIDD1 SNORA52 POLR2L TALDO1

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