Genomic Map
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Target Gene Details
Entrez Gene ID: | 6869 |
Gene Name: | tachykinin receptor 1 |
Gene Aliases: |
NK1R, NKIR, SPR, TAC1R |
Location: |
Chr.2:75046463-75199519 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TACR1 | NM_001058.3 | NP_001049.1 | ||
| NM_015727.2 | NP_056542.1 | |||
| AK289765.1 | ||||
| AY462098.1 | AAR23925.1 | |||
| BC074911.2 | AAH74911.1 | |||
| BC074912.2 | AAH74912.1 | |||
| BC095528.1 | AAH95528.1 | |||
| M74290.1 | AAA60601.1 | |||
| M76675.1 | AAA59936.1 | |||
| M81797.1 | AAA59933.1 | |||
| M84425.1 | AAA36641.1 | |||
| M84426.1 | AAA36644.1 | |||
| S62045.1 | AAB20168.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv998145 | Chr.2:74969670 - 75241030 on Build GRCh38 | Loss |
 TACR1
LOC105374811
POLE4
MIR5000
|
| nsv834262 | Chr.2:74907892 - 75062072 on Build GRCh38 | Gain |
TACR1
POLE4
LINC01291
LOC105374809
LINC01293
|
| nsv1001495 | Chr.2:74598036 - 75093218 on Build GRCh38 | Gain |
M1AP
TACR1
POLE4
HK2
LINC01291
LOC105374809
LINC01293
SEMA4F
MIR5000
|
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Additional Information:
For this assay, SNP(s) [rs201591019] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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