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Gene Symbol
PIDD1
Assay Reference Genome
Location

Chr.11:799397 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00701729_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55367

Gene Name:

 p53-induced death domain protein 1

Gene Aliases:

 LRDD, PIDD

Location:

 Chr.11:799179-809504 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIDD1 NM_145886.3 16 2790 NP_665893.2
NM_145887.3 16 2739 NP_665894.2
XM_005253005.4 16 3800 XP_005253062.1
XM_005253006.4 16 3363 XP_005253063.1
XM_005253007.3 15 2880 XP_005253064.1
XM_005253008.4 16 3860 XP_005253065.1
XM_011520209.2 16 2975 XP_011518511.1
XM_011520210.2 17 3728 XP_011518512.1
XM_011520211.2 17 3677 XP_011518513.1
XM_011520212.1 15 2940 XP_011518514.1
XM_011520213.2 13 2082 XP_011518515.1
XM_017017993.1 13 2222 XP_016873482.1
AB208832.1 12 3782 BAD92069.1
AB208949.1 10 4285 BAD92186.1
AB209529.1 14 3700 BAD92766.1
AF229178.1 15 2959 AAF69491.1
AF274972.1 16 2786 AAG13461.1
AF465246.1 13 2170 AAP97716.1
AK074893.1 13 1725 BAC11272.1
AL833849.1 11 2214 CAD38708.1
BC014904.1 15 2677 AAH14904.1
BQ214414.1 2 248

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss PDDC1 CRACR2B LOC171391 PIDD1 CD151 PNPLA2 SLC25A22 POLR2L TSPAN4 CEND1 SNORA52 PANO1 RPLP2 CHID1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TMEM80 PDDC1 SIGIRR AP2A2 MIR210 MUC6 PKP3 LRRC56 CD151 PNPLA2 DRD4 DEAF1 EPS8L2 POLR2L TSPAN4 CDHR5 HRAS CEND1 PANO1 RPLP2 LMNTD2 SCT LOC101059906 MUC2 MIR210HG RNH1 ANO9 MUC5AC IRF7 TALDO1 CRACR2B PHRF1 LOC171391 PIDD1 SLC25A22 RASSF7 MIR6744 TOLLIP MUC5B B4GALNT4 SNORA52 LOC101927503 LOC143666 PTDSS2 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PDDC1 AP2A2 CRACR2B LOC171391 PIDD1 CD151 PNPLA2 SLC25A22 POLR2L TSPAN4 CEND1 SNORA52 PANO1 RPLP2 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss TMEM80 PDDC1 SIGIRR AP2A2 MIR210 MUC6 TOLLIP-AS1 LRRC56 CD151 PNPLA2 DRD4 DEAF1 EPS8L2 POLR2L TSPAN4 CDHR5 HRAS CEND1 PANO1 RPLP2 LMNTD2 SCT LOC101059906 MUC2 MIR210HG RNH1 ANO9 MUC5AC IRF7 TALDO1 CRACR2B PHRF1 LOC171391 PIDD1 SLC25A22 RASSF7 MIR6744 TOLLIP MUC5B SNORA52 LOC101927503 LOC143666 PTDSS2 CHID1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TMEM80 PDDC1 SIGIRR AP2A2 MIR210 PKP3 LRRC56 CD151 PNPLA2 DRD4 DEAF1 EPS8L2 POLR2L TSPAN4 CDHR5 HRAS CEND1 PANO1 RPLP2 LMNTD2 SCT LOC101059906 MIR210HG RNH1 ANO9 IRF7 TALDO1 CRACR2B PHRF1 LOC171391 PIDD1 SLC25A22 RASSF7 B4GALNT4 SNORA52 LOC143666 PTDSS2 CHID1
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss PDDC1 TALDO1 CEND1 LOC171391 PIDD1 PANO1 RPLP2 SLC25A22
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PDDC1 CRACR2B LOC171391 PIDD1 CD151 PNPLA2 SLC25A22 POLR2L TSPAN4 CEND1 SNORA52 PANO1 RPLP2 CHID1
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain PDDC1 CRACR2B CEND1 SNORA52 LOC171391 PIDD1 PANO1 CD151 RPLP2 PNPLA2 SLC25A22
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion TMEM80 PDDC1 MIR210 LRRC56 CD151 PNPLA2 DRD4 DEAF1 EPS8L2 POLR2L TSPAN4 CDHR5 HRAS CEND1 PANO1 RPLP2 LMNTD2 SCT LOC101059906 MIR210HG RNH1 IRF7 TALDO1 CRACR2B PHRF1 LOC171391 PIDD1 SLC25A22 RASSF7 SNORA52 LOC143666 PTDSS2 CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PDDC1 TALDO1 CRACR2B LOC171391 PIDD1 CD151 PNPLA2 SLC25A22 POLR2L TSPAN4 CEND1 SNORA52 PANO1 RPLP2 CHID1

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