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See other CABP5 CNV Assays ›
Gene Symbol
CABP5
Assay Reference Genome
Location

Chr.19:48048002 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00708754_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 56344

Gene Name:

 calcium binding protein 5

Gene Aliases:

 CABP3

Location:

 Chr.19:48029383-48048342 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CABP5 XM_017026992.1 2 284 XP_016882481.1

Target Gene Details

Entrez Gene ID:

 8605

Gene Name:

 phospholipase A2 group IVC

Gene Aliases:

 CPLA2-gamma

Location:

 Chr.19:48047843-48111445 on Build GRCh38

Assay Gene Location:

 Within Exon 21
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLA2G4C NM_001159322.1 17 2334 NP_001152794.1
NM_001159323.1 17 2408 NP_001152795.1
NM_003706.2 17 2365 NP_003697.2
XM_011527431.2 16 2904 XP_011525733.1
XM_017027411.1 16 2947 XP_016882900.1
XM_017027412.1 18 3387 XP_016882901.1
XM_017027413.1 18 3430 XP_016882902.1
AF058921.1 17 2276 AAC32823.1
AF065214.1 17 2310 AAC78835.1
AK022440.1 17 2338
AK295400.1
AL050193.1 3 642 CAB43312.3
BC063416.1 17 2348 AAH63416.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833853 Chr.19:47982539 - 48184317 on Build GRCh38 Loss C19orf68 LIG1 PLA2G4C CABP5 ELSPBP1 PLA2G4C-AS1 BSPH1
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss DBP SNAR-G2 KCNA7 FUZ LOC101059948 CD37 NUP62 PTOV1 C19orf68 BCL2L12 FGF21 TMEM143 AP2A1 ADM5 TSKS HRC TEAD2 SNAR-A7 SNAR-A9 MIR4324 CGB8 RPL18 C19orf73 SPACA4 RUVBL2 SNORD35A RPL13A MIR4749 DKKL1 LIN7B KCNJ14 PNKP SNAR-C3 SNORD32A NUCB1-AS1 SNORD35B SNAR-C2 CYTH2 LHB MIR5088 LOC100287477 PPFIA3 DHDH CPT1C MIR6799 SLC17A7 BCAT2 NOSIP TBC1D17 NTF4 IRF3 CGB1 CARD8 GRWD1 SNAR-C5 PTOV1-AS2 FUT1 PLA2G4C PRRG2 BAX RRAS SNORD33 KDELR1 FLJ26850 FUT2 LIG1 SNAR-A13 SNAR-B1 FCGRT GYS1 PTOV1-AS1 PIH1D1 MIR150 SNAR-G1 CGB2 SNAR-B2 SNAR-A1 ALDH16A1 TULP2 SNRNP70 SNAR-C4 LOC105447645 SNAR-C1 PLA2G4C-AS1 LMTK3 BSPH1 IL4I1 SIGLEC11 FLT3LG SNORD34 FAM83E MAMSTR AKT1S1 SNAR-A11 MIR6800 FTL ZNF473 RASIP1 MED25 SNAR-A14 PPP1R15A PRR12 MIR4750 ATF5 LOC101928295 NUCB1 HSD17B14 CARD8-AS1 CA11 SNAR-A5 RCN3 SNAR-D SEC1P VRK3 EMP3 GRIN2D TRPM4 SLC6A16 IZUMO1 MIR4751 GFY CGB7 SNAR-A2 CGB3 ZNF114 SNAR-A3 CCDC155 SNAR-A12 CCDC114 CGB5 LOC105372430 RPS11 MIR6798 SNAR-A8 SULT2B1 ELSPBP1 SIGLEC16 PLEKHA4 SNAR-A10 NTN5 SPHK2 SCAF1 SNAR-A6 SYNGR4 CABP5 PRMT1 PTH2 SNAR-A4
esv34181 Chr.19:48009377 - 48416682 on Build GRCh38 Loss CARD8 CCDC114 PLA2G4C ELSPBP1 PLA2G4C-AS1 KDELR1 CARD8-AS1 C19orf68 LIG1 ZNF114 SYNGR4 CABP5 TMEM143 EMP3 GRIN2D
dgv3611n100 Chr.19:48024325 - 48081406 on Build GRCh38 Gain PLA2G4C CABP5 ELSPBP1 PLA2G4C-AS1
nsv1058785 Chr.19:48004749 - 48075632 on Build GRCh38 Gain PLA2G4C CABP5 ELSPBP1 PLA2G4C-AS1
nsv1062163 Chr.19:48040339 - 48075632 on Build GRCh38 Gain PLA2G4C CABP5 PLA2G4C-AS1
nsv2516 Chr.19:48046715 - 48080669 on Build GRCh38 Insertion PLA2G4C CABP5 PLA2G4C-AS1
esv3893228 Chr.19:48002211 - 48072851 on Build GRCh38 Loss PLA2G4C CABP5 ELSPBP1 PLA2G4C-AS1
nsv1058622 Chr.19:47798576 - 48077885 on Build GRCh38 Gain SNAR-C5 CRX TPRX1 SNAR-A1 SNAR-C3 PLA2G4C SNAR-C2 SULT2A1 ELSPBP1 SNAR-C4 SNAR-C1 PLA2G4C-AS1 SNAR-A2 BSPH1 SNAR-A13 SNAR-A3 LINC01595 CABP5 SNAR-A12

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