Hs00715771_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48041638 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AA318398.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	BSPH1 PLA2G4C-AS1 CABP5 ELSPBP1 C19orf68 LIG1 PLA2G4C
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	CD37 SNAR-G1 LOC101059948 PTOV1-AS2 SLC6A16 SNAR-A13 BCL2L12 PTH2 ZNF114 SCAF1 SNAR-C4 SNAR-A5 SNRNP70 SNAR-D SNORD35A ATF5 TBC1D17 SNAR-A3 LOC100287477 NTF4 IRF3 RPS11 VRK3 MIR4751 LMTK3 SNAR-G2 SNORD33 CYTH2 MIR5088 SIGLEC16 PLA2G4C-AS1 PRRG2 NUP62 RRAS CCDC114 SNAR-C2 SNAR-A1 BAX PNKP SNAR-A12 FGF21 SNAR-A7 SNORD32A CGB1 MIR6798 SNORD34 PRMT1 SNAR-A4 FUT1 GRIN2D FLT3LG ALDH16A1 HSD17B14 SNORD35B SNAR-C3 SPACA4 MIR4749 IZUMO1 CGB5 SNAR-C5 PTOV1 SIGLEC11 TRPM4 MIR6800 CGB8 MIR4750 FUZ MIR6799 CA11 GYS1 NUCB1 CARD8 LIN7B DHDH AKT1S1 BCAT2 KDELR1 SPHK2 GFY IL4I1 SNAR-A10 DKKL1 SNAR-A11 SNAR-A8 SNAR-A14 MED25 PPFIA3 DBP CABP5 SNAR-A9 LOC101928295 CPT1C LIG1 KCNA7 TMEM143 BSPH1 FAM83E RUVBL2 TULP2 TSKS LHB CGB2 SNAR-B1 TEAD2 AP2A1 MIR150 PLEKHA4 ZNF473 SNAR-A6 FTL PPP1R15A MIR4324 SULT2B1 RPL13A MAMSTR FCGRT C19orf68 ADM5 EMP3 SEC1P LOC105447645 NOSIP CARD8-AS1 HRC C19orf73 SNAR-B2 LOC105372430 PLA2G4C SNAR-C1 FUT2 KCNJ14 PIH1D1 RASIP1 PRR12 RPL18 CCDC155 SYNGR4 NTN5 CGB3 NUCB1-AS1 SLC17A7 GRWD1 FLJ26850 ELSPBP1 PTOV1-AS1 RCN3 CGB7 SNAR-A2
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	PLA2G4C-AS1 ZNF114 SYNGR4 C19orf68 CCDC114 EMP3 GRIN2D CARD8 CABP5 ELSPBP1 CARD8-AS1 KDELR1 LIG1 PLA2G4C TMEM143
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C-AS1 CABP5 ELSPBP1 PLA2G4C
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 CABP5 ELSPBP1 PLA2G4C
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 CABP5 PLA2G4C
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 CABP5 ELSPBP1 PLA2G4C
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-C5 BSPH1 SNAR-A13 SULT2A1 PLA2G4C-AS1 SNAR-C4 CRX SNAR-A3 SNAR-C2 LINC01595 SNAR-A1 CABP5 ELSPBP1 TPRX1 SNAR-A12 SNAR-C3 PLA2G4C SNAR-A2 SNAR-C1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding