Hs00722294_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67877384 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Overlaps Exon 5 - Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4			NP_055144.3
	AK128582.1
	AK291049.1
	AK302563.1
	BC043616.1			AAH43616.1
	BC064567.1			AAH64567.1
	BX445706.2
	L26339.1			AAA21833.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	PARD6A KIAA0895L EXOC3L1 CTRL C16orf86 DUS2 THAP11 ACD ENKD1 TPPP3 E2F4 ZDHHC1 HSF4 PLEKHG4 AGRP TMEM208 SLC12A4 SLC9A5 PSKH1 LRRC36 LOC105369155 NOL3 LOC107984813 RANBP10 CENPT PSMB10 DPEP3 CARMIL2 NRN1L TSNAXIP1 HSD11B2 GFOD2 DDX28 LOC100131303 KCTD19 DPEP2 LCAT LRRC29 LOC100505942 FHOD1 TRADD ATP6V0D1 FAM65A EDC4 MIR328 ELMO3 CTCF FBXL8 NUTF2
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	PSKH1 EDC4 NRN1L NUTF2
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	PARD6A KIAA0895L EXOC3L1 CTRL C16orf86 DUS2 THAP11 ACD ENKD1 TPPP3 E2F4 ZDHHC1 HSF4 PLEKHG4 AGRP TMEM208 SLC12A4 C16orf70 SLC9A5 PSKH1 LRRC36 LOC105369155 NOL3 LOC107984813 RANBP10 CENPT PSMB10 DPEP3 CARMIL2 NRN1L TSNAXIP1 HSD11B2 GFOD2 DDX28 LOC100131303 KCTD19 DPEP2 LCAT B3GNT9 LRRC29 LOC100505942 FHOD1 TRADD ATP6V0D1 FAM65A EDC4 MIR328 ELMO3 CTCF FBXL8 NUTF2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding