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See other TCF25 CNV Assays ›
Gene Symbol
TCF25
Assay Reference Genome
Location

Chr.16:89884596 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00723907_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22980

Gene Name:

 transcription factor 25

Gene Aliases:

 FKSG26, Hulp1, NULP1, PRO2620, hKIAA1049

Location:

 Chr.16:89873583-89911384 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCF25 NM_014972.2 NP_055787.1
XM_005256297.2 XP_005256354.1
XM_005256298.2 XP_005256355.1
XM_005256299.2 XP_005256356.1
XM_011522956.2 XP_011521258.1
XM_011522957.2 XP_011521259.1
XM_011522958.2 XP_011521260.1
XM_011522959.2 XP_011521261.1
XM_011522960.2 XP_011521262.1
XM_011522961.2 XP_011521263.1
XM_017023047.1 XP_016878536.1
XM_017023048.1 XP_016878537.1
XM_017023049.1 XP_016878538.1
XM_017023050.1 XP_016878539.1
XM_017023051.1 XP_016878540.1
XM_017023052.1 XP_016878541.1
XM_017023053.1 XP_016878542.1
XM_017023054.1 XP_016878543.1
XM_017023055.1 XP_016878544.1
XM_017023056.1 XP_016878545.1
XM_017023057.1 XP_016878546.1
XM_017023058.1 XP_016878547.1
AB028972.1 BAA83001.1
AF322111.1 AAG50276.1
AK024679.1 BAB14959.1
BC000959.1 AAH00959.1
BC009349.2 AAH09349.1
BC011884.2 AAH11884.1
BI913551.1
DQ321703.1 ABC55265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573744 Chr.16:89738447 - 89915950 on Build GRCh38 Loss LOC105371419 SPIRE2 FANCA TCF25 LOC107984817 ZNF276
esv2758671 Chr.16:89804324 - 89901541 on Build GRCh38 Loss LOC105371419 SPIRE2 FANCA TCF25 LOC107984817
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss SPIRE2 FANCA DPEP1 TCF25 GAS8 AFG3L1P DEF8 DBNDD1 SPATA33 VPS9D1 GAS8-AS1 ZNF276 LOC105371419 SPATA2L CHMP1A CENPBD1 CDK10 LOC107984817 MC1R VPS9D1-AS1 TUBB3
nsv573810 Chr.16:89857498 - 90037251 on Build GRCh38 Loss SPIRE2 CENPBD1 TCF25 GAS8 AFG3L1P DEF8 MC1R DBNDD1 TUBB3 GAS8-AS1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss SPG7 FANCA TCF25 AFG3L1P LOC101927817 SNORD68 SPATA33 VPS9D1 ZNF276 LOC105371419 SPATA2L RPL13 CDK10 LOC100287036 VPS9D1-AS1 PRDM7 SPIRE2 DPEP1 GAS8 URAHP DEF8 CPNE7 DBNDD1 GAS8-AS1 FAM157C CHMP1A CENPBD1 ANKRD11 ZNF778 LOC107984817 MC1R TUBB8P7 TUBB3 LOC105371414
nsv573799 Chr.16:89852186 - 90022379 on Build GRCh38 Gain LOC105371419 SPIRE2 CENPBD1 TCF25 GAS8 AFG3L1P DEF8 MC1R DBNDD1 TUBB3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SPG7 LOC101927793 FANCA AFG3L1P LOC101927817 ZNF276 LOC107987238 LOC100129697 CDH15 LOC100287036 VPS9D1-AS1 CDT1 MIR4722 ACSF3 TRAPPC2L APRT DPEP1 LINC00304 GAS8 URAHP PABPN1L DEF8 SNAI3 SLC22A31 CPNE7 CHMP1A CBFA2T3 GALNS ZNF778 LOC107984817 MC1R TUBB8P7 CYBA TCF25 PIEZO1 SNORD68 SPATA33 IL17C VPS9D1 LOC105371419 SPATA2L LOC100289580 LOC400558 RPL13 CTU2 CDK10 MVD PRDM7 SPIRE2 LOC339059 DBNDD1 GAS8-AS1 FAM157C LOC105371409 RNF166 CENPBD1 ANKRD11 SNAI3-AS1 TUBB3 LOC105371414

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