Hs00769450_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67880942 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Within Exon 18

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4	18	2722	NP_055144.3
	AK128582.1	17	3196
	AK291049.1	18	2490
	BC043616.1	18	2625	AAH43616.1
	BC053598.1	13	1862	AAH53598.1
	BC064567.1	18	2619	AAH64567.1
	L26339.1	18	2619	AAA21833.1
	U17474.1	8	1259	AAB51444.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	DPEP3 CENPT PSMB10 E2F4 FAM65A EDC4 RANBP10 PARD6A PSKH1 C16orf86 LRRC36 KIAA0895L HSF4 GFOD2 LOC100505942 HSD11B2 SLC9A5 TPPP3 ATP6V0D1 AGRP FHOD1 ZDHHC1 FBXL8 LRRC29 CTRL DPEP2 SLC12A4 MIR328 NOL3 EXOC3L1 TRADD DUS2 KCTD19 ACD NUTF2 ENKD1 PLEKHG4 NRN1L CTCF CARMIL2 THAP11 TSNAXIP1 ELMO3 DDX28 LCAT TMEM208 LOC105369155 LOC100131303 LOC107984813
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	EDC4 NUTF2 NRN1L PSKH1
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	DPEP3 CENPT PSMB10 E2F4 FAM65A EDC4 RANBP10 PARD6A PSKH1 C16orf86 LRRC36 KIAA0895L HSF4 GFOD2 LOC100505942 HSD11B2 SLC9A5 TPPP3 ATP6V0D1 AGRP FHOD1 ZDHHC1 FBXL8 LRRC29 CTRL C16orf70 DPEP2 SLC12A4 MIR328 NOL3 EXOC3L1 TRADD DUS2 KCTD19 ACD NUTF2 ENKD1 PLEKHG4 NRN1L CTCF CARMIL2 THAP11 TSNAXIP1 B3GNT9 ELMO3 DDX28 LCAT TMEM208 LOC105369155 LOC100131303 LOC107984813

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding