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See other MADCAM1 CNV Assays ›
Gene Symbol
MADCAM1
Assay Reference Genome
Location

Chr.19:498809 on build GRCh38
Cytoband
19p13.3
Assay ID Hs00815579_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8174

Gene Name:

 mucosal vascular addressin cell adhesion molecule 1

Gene Aliases:

 MACAM1

Location:

 Chr.19:496490-505343 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MADCAM1 NM_130760.2 NP_570116.2
NM_130762.2 NP_570118.1
AK092211.1
AY732484.1 AAV33123.1
AY819760.1 AAV68345.1
BC136408.1
BC137506.1
BC137507.1
BC142629.1
BC144065.1
DQ076657.1 AAY82472.1
U43628.1 AAB02194.1
U82483.1 AAC13661.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516566 Chr.19:495722 - 525739 on Build GRCh38 Gain TPGS1 MADCAM1
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain FSTL3 CDC34 MADCAM1 C2CD4C BSG LOC101929060 RNF126 FGF22 HCN2 SHC2 PRSS57 POLRMT TPGS1 PLPP2 GZMM THEG MIER2 ODF3L2
dgv6155n54 Chr.19:404077 - 519032 on Build GRCh38 Loss SHC2 TPGS1 MADCAM1 C2CD4C ODF3L2
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain FSTL3 CDC34 MADCAM1 C2CD4C LOC101928450 BSG LOC101929060 RNF126 FGF22 HCN2 SHC2 PRSS57 POLRMT TPGS1 PALM GZMM THEG MIER2 ODF3L2 MISP
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion CFD GPX4 MADCAM1 C2CD4C ABCA7 PLPPR3 LOC101928450 AZU1 ARID3A PRTN3 ARHGAP45 SHC2 PRSS57 POLRMT WDR18 ELANE PALM THEG MIR3187 FSTL3 CDC34 CNN2 GRIN3B BSG POLR2E TMEM259 RNF126 FGF22 R3HDM4 HCN2 KISS1R TPGS1 RNU6-9 PTBP1 RNU6-2 MIR4745 GZMM MED16 ODF3L2 MISP LOC105372235
esv3373423 Chr.19:498836 - 498836 on Build GRCh38 Insertion MADCAM1
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss CFD MADCAM1 C2CD4C PLPPR3 LOC101928450 AZU1 ARID3A PRTN3 SHC2 PRSS57 POLRMT WDR18 ELANE PALM MIR3187 FSTL3 CDC34 GRIN3B BSG RNF126 FGF22 R3HDM4 HCN2 KISS1R TPGS1 RNU6-9 PTBP1 MIR4745 GZMM MED16 ODF3L2 MISP LOC105372235
esv28250 Chr.19:470703 - 521323 on Build GRCh38 Gain+Loss TPGS1 MADCAM1 ODF3L2
nsv509712 Chr.19:391096 - 558643 on Build GRCh38 Insertion SHC2 TPGS1 CDC34 MADCAM1 C2CD4C GZMM ODF3L2
esv3574264 Chr.19:490245 - 516350 on Build GRCh38 Gain TPGS1 MADCAM1 ODF3L2
dgv1013e212 Chr.19:416231 - 521269 on Build GRCh38 Gain SHC2 TPGS1 MADCAM1 ODF3L2
esv33417 Chr.19:474104 - 518906 on Build GRCh38 Gain+Loss TPGS1 MADCAM1 ODF3L2
nsv578114 Chr.19:496724 - 499978 on Build GRCh38 Gain MADCAM1

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