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See other MADCAM1 CNV Assays ›
Gene Symbol
MADCAM1
Assay Reference Genome
Location

Chr.19:498809 on build GRCh38
Cytoband
19p13.3
Assay ID Hs00815579_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 8174

Gene Name:

 mucosal vascular addressin cell adhesion molecule 1

Gene Aliases:

 MACAM1

Location:

 Chr.19:496490-505343 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MADCAM1 NM_130760.2 NP_570116.2
NM_130762.2 NP_570118.1
AK092211.1
AY732484.1 AAV33123.1
AY819760.1 AAV68345.1
BC136408.1
BC137506.1
BC137507.1
BC142629.1
BC144065.1
DQ076657.1 AAY82472.1
U43628.1 AAB02194.1
U82483.1 AAC13661.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516566 Chr.19:495722 - 525739 on Build GRCh38 Gain MADCAM1 TPGS1
dgv6155n54 Chr.19:404077 - 519032 on Build GRCh38 Loss C2CD4C ODF3L2 MADCAM1 SHC2 TPGS1
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain C2CD4C ODF3L2 THEG PLPP2 MADCAM1 BSG TPGS1 HCN2 FSTL3 CDC34 SHC2 GZMM MIER2 FGF22 POLRMT RNF126 PRSS57 LOC101929060
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain PALM C2CD4C MISP ODF3L2 THEG MADCAM1 BSG TPGS1 HCN2 FSTL3 CDC34 SHC2 GZMM LOC101928450 MIER2 FGF22 POLRMT RNF126 PRSS57 LOC101929060
esv3373423 Chr.19:498836 - 498836 on Build GRCh38 Insertion MADCAM1
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion PALM C2CD4C MISP KISS1R GPX4 CNN2 HCN2 CDC34 SHC2 GZMM PLPPR3 ARID3A LOC101928450 FGF22 RNF126 PRSS57 PRTN3 MIR4745 ODF3L2 THEG MADCAM1 BSG ARHGAP45 TMEM259 LOC105372235 ABCA7 RNU6-2 TPGS1 PTBP1 ELANE GRIN3B WDR18 FSTL3 MED16 MIR3187 R3HDM4 AZU1 RNU6-9 CFD POLRMT POLR2E
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss PALM C2CD4C MISP KISS1R HCN2 CDC34 SHC2 GZMM PLPPR3 ARID3A LOC101928450 FGF22 RNF126 PRSS57 PRTN3 MIR4745 ODF3L2 MADCAM1 BSG LOC105372235 TPGS1 PTBP1 ELANE GRIN3B WDR18 FSTL3 MED16 MIR3187 R3HDM4 AZU1 RNU6-9 CFD POLRMT
esv28250 Chr.19:470703 - 521323 on Build GRCh38 Gain+Loss ODF3L2 MADCAM1 TPGS1
esv3574264 Chr.19:490245 - 516350 on Build GRCh38 Gain ODF3L2 MADCAM1 TPGS1
nsv509712 Chr.19:391096 - 558643 on Build GRCh38 Insertion C2CD4C ODF3L2 MADCAM1 SHC2 GZMM TPGS1 CDC34
dgv1013e212 Chr.19:416231 - 521269 on Build GRCh38 Gain ODF3L2 MADCAM1 SHC2 TPGS1
nsv578114 Chr.19:496724 - 499978 on Build GRCh38 Gain MADCAM1
esv33417 Chr.19:474104 - 518906 on Build GRCh38 Gain+Loss ODF3L2 MADCAM1 TPGS1

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