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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88805777 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00818552_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 5 794 NP_112190.2
AB053172.1 5 794 BAB61878.1
AF070552.1 3 335
AF321125.1 5 765 AAG45181.1
BC000137.2 5 756 AAH00137.2
BC008676.1 5 632 AAH08676.1
BC008860.2 5 687 AAH08860.2
BC009410.1 5 750 AAH09410.1
BC014202.2 1 55 AAH14202.2
BC021126.1 3 326
BC049205.1 3 398 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573677 Chr.16:88764428 - 88805821 on Build GRCh38 Loss PIEZO1 CDT1
dgv5313n54 Chr.16:88795879 - 88806103 on Build GRCh38 Loss CDT1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC400558 SLC22A31 APRT CTU2 CDH15 LINC00304 CDT1 CBFA2T3 LOC100129697 TRAPPC2L LOC107987238 LOC105371409 MIR4722 LOC339059 PIEZO1 ZNF778 LOC100289580 PABPN1L ACSF3 LOC101927793 GALNS
nsv457617 Chr.16:88801844 - 88829729 on Build GRCh38 Gain APRT CDT1 GALNS LOC107987238
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain RNF166 MIR4722 LOC339059 APRT PIEZO1 CTU2 CDT1 LOC100289580 GALNS LOC107987238 SNAI3-AS1 SNAI3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC400558 SLC22A31 APRT CDH15 LINC00304 LOC100287036 CDT1 CBFA2T3 LOC100129697 TRAPPC2L LOC105371414 LOC107987238 LOC105371409 LOC339059 PIEZO1 ZNF778 LOC100289580 PABPN1L ACSF3 LOC101927793 GALNS ANKRD11
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion APRT CDT1 PABPN1L CBFA2T3 LOC101927793 GALNS LOC100129697 TRAPPC2L LOC107987238 LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC400558 APRT CDH15 LINC00304 CDT1 CBFA2T3 LOC100129697 TRAPPC2L LOC107987238 LOC105371409 PABPN1L ACSF3 LOC101927793 GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC101927817 TCF25 FANCA TRAPPC2L LOC105371414 FAM157C LOC105371409 MC1R CYBA AFG3L1P VPS9D1 LOC100289580 LOC400558 SLC22A31 SNORD68 IL17C CDT1 LOC100129697 LOC107987238 PRDM7 SNAI3 MIR4722 TUBB3 DEF8 ZNF778 CENPBD1 SPATA2L LOC101927793 GALNS CPNE7 ANKRD11 URAHP CDK10 LOC100287036 LOC105371419 MVD SNAI3-AS1 SPATA33 LOC339059 VPS9D1-AS1 PIEZO1 DBNDD1 GAS8-AS1 PABPN1L CHMP1A ZNF276 DPEP1 APRT SPG7 CTU2 CDH15 LINC00304 TUBB8P7 CBFA2T3 GAS8 RNF166 SPIRE2 LOC107984817 ACSF3 RPL13
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss APRT PIEZO1 CDT1 GALNS TRAPPC2L LOC107987238
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss APRT PIEZO1 CDT1 PABPN1L CBFA2T3 LOC101927793 GALNS LOC100129697 TRAPPC2L LOC107987238 LOC105371409
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain APRT PIEZO1 CDT1 PABPN1L CBFA2T3 LOC101927793 GALNS TRAPPC2L LOC107987238
nsv573715 Chr.16:88804814 - 88808224 on Build GRCh38 Loss CDT1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain APRT CTU2 CDT1 CBFA2T3 LOC100129697 TRAPPC2L LOC107987238 LOC105371409 MIR4722 LOC339059 PIEZO1 LOC100289580 PABPN1L LOC101927793 GALNS
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1

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