Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 823 |
Gene Name: | calpain 1 |
Gene Aliases: |
CANP, CANP1, CANPL1, SPG76, muCANP, muCL |
Location: |
Chr.11:65181215-65212006 on Build GRCh38 |
Assay Gene Location: | Within Exon 12 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CAPN1 | NM_001198868.1 | 10 | 1264 | NP_001185797.1 |
| NM_001198869.1 | 10 | 1233 | NP_001185798.1 | |
| NM_005186.3 | 10 | 1249 | NP_005177.2 | |
| NR_040008.1 | 9 | 1179 | ||
| XM_006718698.1 | 10 | 1164 | XP_006718761.1 | |
| XM_011545292.1 | 10 | 1175 | XP_011543594.1 | |
| AK301538.1 | 9 | 1071 | ||
| AK311001.1 | ||||
| AK315556.1 | 10 | 1178 | ||
| AY550975.1 | 9 | 1072 | AAT52221.1 | |
| BC008751.2 | 10 | 1200 | AAH08751.1 | |
| BC017200.2 | 10 | 1086 | AAH17200.1 | |
| BC075862.1 | 10 | 1167 | AAH75862.1 | |
| X04366.1 | 10 | 1210 | CAA27881.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv509418 | Chr.11:65164531 - 65202781 on Build GRCh38 | Insertion |
 CAPN1
SPDYC
|
| nsv526181 | Chr.11:64870569 - 65489858 on Build GRCh38 | Gain |
TMEM262
MRPL49
NEAT1
TIGD3
VPS51
MIR6879
SLC22A20
POLA2
MAJIN
ARL2-SNX15
FRMD8
DPF2
MIR194-2HG
EHD1
SLC25A45
SYVN1
MIR192
PPP2R5B
GPHA2
CDCA5
ARL2
SPDYC
ZNHIT2
MIR6749
MIR612
SAC3D1
NAALADL1
MIR6751
LOC101927789
MIR194-2
ATG2A
FAU
CDC42EP2
CAPN1
ZFPL1
SNX15
MIR6750
BATF2
TM7SF2
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top