Hs00841952_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48030567 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1
	BQ185108.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	ELSPBP1 C19orf68 CABP5 PLA2G4C LIG1 BSPH1 PLA2G4C-AS1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	IZUMO1 PTOV1-AS2 SLC6A16 GYS1 FUT2 C19orf73 NTN5 DKKL1 MIR6799 TBC1D17 RPL13A SULT2B1 TEAD2 TULP2 BSPH1 CYTH2 ELSPBP1 KCNA7 SNAR-C5 SNAR-G1 ZNF473 PRRG2 NTF4 LOC105372430 SNAR-A14 SCAF1 SNAR-A9 CGB1 FUZ C19orf68 TRPM4 LIG1 BCL2L12 SNORD32A SYNGR4 LOC101059948 VRK3 FTL SNAR-C2 GRIN2D SNAR-A6 SNAR-A11 PTH2 CGB2 CPT1C BCAT2 SNAR-A8 MIR4750 PPFIA3 GFY MIR4324 CABP5 SNAR-D SNAR-C3 SNAR-A2 MED25 AKT1S1 SNORD33 CARD8-AS1 NUCB1 SPHK2 PNKP SNORD34 NUCB1-AS1 HSD17B14 SNAR-A5 ADM5 PLEKHA4 DBP MIR6800 BAX SEC1P PPP1R15A SNAR-B2 RCN3 RUVBL2 RPL18 KDELR1 MAMSTR LMTK3 ZNF114 SNORD35A PLA2G4C SNRNP70 FGF21 SNAR-C4 SIGLEC16 FLJ26850 PTOV1 NUP62 MIR6798 RRAS LIN7B SNAR-A10 IL4I1 SNAR-A7 MIR5088 SNAR-C1 CGB3 SNORD35B HRC FCGRT MIR4749 CD37 AP2A1 CGB5 RPS11 EMP3 SNAR-A1 NOSIP GRWD1 FAM83E KCNJ14 CCDC155 CARD8 LOC105447645 PIH1D1 SNAR-A3 LHB FUT1 CGB8 MIR4751 MIR150 PRMT1 SNAR-A13 CCDC114 SLC17A7 LOC100287477 SNAR-G2 ALDH16A1 PLA2G4C-AS1 IRF3 LOC101928295 SNAR-A4 PTOV1-AS1 RASIP1 TSKS SNAR-A12 CGB7 FLT3LG CA11 SPACA4 TMEM143 PRR12 SIGLEC11 DHDH SNAR-B1 ATF5
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8 ELSPBP1 CABP5 GRIN2D KDELR1 CARD8-AS1 TMEM143 C19orf68 ZNF114 EMP3 PLA2G4C CCDC114 LIG1 SYNGR4 PLA2G4C-AS1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	ELSPBP1 CABP5 SNAR-C5 SNAR-A12 SNAR-C3 SNAR-C2 SNAR-A2 SNAR-C1 SNAR-A3 SULT2A1 CRX SNAR-A13 SNAR-A1 LINC01595 BSPH1 TPRX1 SNAR-C4
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	ELSPBP1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	ELSPBP1 CABP5 SNAR-C5 SNAR-A12 SNAR-C3 SNAR-C2 SNAR-A2 SNAR-C1 SNAR-A3 SULT2A1 CRX SNAR-A13 SNAR-A1 PLA2G4C LINC01595 BSPH1 TPRX1 SNAR-C4 PLA2G4C-AS1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding