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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31659627 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00848531_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 1146 NP_067007.3
AJ245433.1 1 1107 CAB51603.1
AK315349.1 1 835
BC012950.1 1 1146 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion DDX39B-AS1 GPSM3 MIR6721 C4B GPANK1 SNORD117 SNORD52 SNORD48 LY6G6D LY6G6E TNXA LY6G6C SAPCD1 CYP21A1P HCP5 EGFL8 C6orf25 ABHD16A TNF MIR4646 ZBTB12 PPT2 HCG23 BAG6 LST1 SKIV2L MIR1236 AGPAT1 ATP6V1G2-DDX39B LY6G6F SNORA38 NOTCH4 RNF5 C6orf48 APOM MIR6833 TNXB MCCD1 C4A HCG26 AIF1 LY6G5B LOC102725068 CFB VWA7 LTA BTNL2 MSH5 ATP6V1G2 HLA-DRB6 PPT2-EGFL8 NCR3 ATF6B C6orf10 LSM2 MICB HSPA1L LOC100507547 MIR6832 C2-AS1 DXO CYP21A2 NEU1 C2 HLA-DRB5 HSPA1A PBX2 EHMT2 PRRT1 CLIC1 HLA-DRA DDX39B SLC44A4 HSPA1B MSH5-SAPCD1 VARS PRRC2A NFKBIL1 NELFE LY6G5C LTB LOC100287329 SAPCD1-AS1 HLA-DRB1 AGER FKBPL CSNK2B STK19 SNORD84 DDAH2 LOC101929163 C6orf47
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss AIF1 MIR6832 GPANK1 SNORA38 PRRC2A BAG6 C6orf47 APOM
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss DDX39B-AS1 C4B GPANK1 SNORD117 SNORD52 SNORD48 LY6G6D LY6G6E TNXA LY6G6C SAPCD1 CYP21A1P HCP5 C6orf25 ABHD16A TNF MIR4646 ZBTB12 BAG6 LST1 SKIV2L MIR1236 ATP6V1G2-DDX39B LY6G6F SNORA38 C6orf48 APOM TNXB MCCD1 C4A HCG26 AIF1 LY6G5B LOC102725068 CFB VWA7 LTA MSH5 ATP6V1G2 NCR3 LSM2 MICB HSPA1L MIR6832 C2-AS1 MIR6891 DXO CYP21A2 NEU1 C2 HSPA1A EHMT2 MICA CLIC1 DDX39B SLC44A4 HSPA1B MSH5-SAPCD1 VARS PRRC2A NFKBIL1 NELFE LY6G5C LTB LOC100287329 SAPCD1-AS1 CSNK2B HLA-B STK19 SNORD84 DDAH2 C6orf47
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion DDX39B-AS1 C4B GPANK1 SNORD117 SNORD52 SNORD48 LY6G6E TNXA HCP5 HCG24 PHF1 SYNGAP1 HLA-DMB MIR219A1 VPS52 TNF MIR4646 ZBTB12 PPT2 BAG6 SKIV2L MIR1236 LY6G6F SNORA38 MIR5004 HLA-DQA2 C6orf48 TNXB TAP1 HCG26 HLA-DPB1 HLA-DPA1 TAP2 ZBTB9 CFB HLA-DQB1 BTNL2 B3GALT4 ATP6V1G2 HLA-DRB6 ATF6B RGL2 LSM2 PSMB8 MIR6873 PPP1R2P1 RPS18 HSPA1L LOC100507547 MIR6832 HLA-DQA1 DXO LOC100294145 CUTA EHMT2 PRRT1 PFDN6 PSMB8-AS1 HLA-DRA KIFC1 MSH5-SAPCD1 HLA-DQB2 PRRC2A LY6G5C MIR3135B SAPCD1-AS1 HLA-DRB1 RING1 FKBPL CSNK2B STK19 DDAH2 GPSM3 MIR6721 HLA-DQB1-AS1 LY6G6D COL11A2 LY6G6C SAPCD1 CYP21A1P EGFL8 C6orf25 ABHD16A HCG23 LST1 AGPAT1 ATP6V1G2-DDX39B NOTCH4 RNF5 HLA-DOA APOM MIR6833 MCCD1 C4A HLA-DMA BRD2 AIF1 LY6G5B LOC102725068 VWA7 LTA MSH5 SLC39A7 HLA-DPB2 PPT2-EGFL8 NCR3 C6orf10 MICB RXRB MIR6834 C2-AS1 CYP21A2 NEU1 C2 HLA-DRB5 HSPA1A HSD17B8 DAXX PBX2 CLIC1 HLA-DOB TAPBP DDX39B SLC44A4 HSPA1B VARS NFKBIL1 NELFE HCG25 LTB LOC100287329 AGER ZBTB22 SNORD84 LOC101929163 WDR46 C6orf47 PSMB9
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion DDX39B-AS1 C4B GPANK1 SNORD117 SNORD52 SNORD48 LY6G6E TNXA HCP5 HCG24 PHF1 SYNGAP1 HLA-DMB MIR219A1 VPS52 TNF MIR4646 ZBTB12 PPT2 BAG6 SKIV2L MIR1236 LY6G6F SNORA38 MIR5004 HLA-DQA2 C6orf48 TNXB TAP1 HCG26 HLA-DPB1 HLA-DPA1 TAP2 ZBTB9 CFB HLA-DQB1 BTNL2 B3GALT4 ATP6V1G2 HLA-DRB6 ATF6B RGL2 LSM2 PSMB8 MIR6873 PPP1R2P1 RPS18 HSPA1L LOC100507547 MIR6832 HLA-DQA1 DXO LOC100294145 CUTA EHMT2 PRRT1 PFDN6 PSMB8-AS1 HLA-DRA KIFC1 MSH5-SAPCD1 HLA-DQB2 PRRC2A LY6G5C MIR3135B SAPCD1-AS1 HLA-DRB1 RING1 FKBPL CSNK2B STK19 DDAH2 GPSM3 MIR6721 HLA-DQB1-AS1 LY6G6D COL11A2 LY6G6C SAPCD1 CYP21A1P EGFL8 C6orf25 ABHD16A HCG23 LST1 AGPAT1 ATP6V1G2-DDX39B NOTCH4 RNF5 HLA-DOA APOM MIR6833 MCCD1 C4A HLA-DMA BRD2 AIF1 LY6G5B LOC102725068 VWA7 LTA MSH5 SLC39A7 HLA-DPB2 PPT2-EGFL8 NCR3 C6orf10 MICB RXRB MIR6834 C2-AS1 CYP21A2 NEU1 C2 HLA-DRB5 HSPA1A HSD17B8 DAXX PBX2 CLIC1 HLA-DOB TAPBP DDX39B SLC44A4 HSPA1B VARS NFKBIL1 NELFE HCG25 LTB LOC100287329 AGER ZBTB22 SNORD84 LOC101929163 WDR46 C6orf47 PSMB9
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss DDX39B-AS1 GPSM3 MIR6721 C4B GPANK1 SNORD117 SNORD52 SNORD48 LY6G6D LY6G6E TNXA LY6G6C SAPCD1 CYP21A1P HCP5 EGFL8 C6orf25 ABHD16A TNF MIR4646 ZBTB12 PPT2 HCG23 BAG6 LST1 SKIV2L MIR1236 AGPAT1 ATP6V1G2-DDX39B LY6G6F SNORA38 NOTCH4 RNF5 C6orf48 APOM MIR6833 TNXB MCCD1 C4A HCG26 AIF1 LY6G5B LOC102725068 CFB VWA7 LTA BTNL2 MSH5 ATP6V1G2 PPT2-EGFL8 NCR3 ATF6B C6orf10 LSM2 MICB HSPA1L LOC100507547 MIR6832 C2-AS1 MIR6891 DXO CYP21A2 NEU1 C2 HSPA1A PBX2 EHMT2 PRRT1 MICA CLIC1 HLA-DRA DDX39B SLC44A4 HSPA1B MSH5-SAPCD1 VARS PRRC2A NFKBIL1 NELFE LY6G5C LTB LOC100287329 SAPCD1-AS1 AGER FKBPL CSNK2B HLA-B STK19 SNORD84 DDAH2 LOC101929163 C6orf47
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion GPANK1 LY6G6F SNORA38 PRRC2A LY6G6E LY6G5C APOM ABHD16A AIF1 MIR6832 LY6G5B MIR4646 CSNK2B BAG6 C6orf47
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss NCR3 DDX39B-AS1 GPANK1 SNORD117 ABHD16A MIR6832 TNF BAG6 LST1 ATP6V1G2-DDX39B DDX39B SNORA38 PRRC2A NFKBIL1 LY6G5C LTB APOM MCCD1 LOC100287329 AIF1 LY6G5B CSNK2B SNORD84 LTA C6orf47 ATP6V1G2

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