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See other PSMB9 CNV Assays ›
Gene Symbol
PSMB9
Assay Reference Genome
Location

Chr.6:32858385 on build GRCh38
Cytoband
6p21.32
Assay ID Hs00868399_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5698

Gene Name:

 proteasome subunit beta 9

Gene Aliases:

 LMP2, PSMB6i, RING12, beta1i

Location:

 Chr.6:32854161-32859851 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PSMB9 NM_002800.4 NP_002791.1
AK303118.1
BC065513.1 AAH65513.1
BI832878.1
BM998687.1
BX641100.1
CR541656.1 CAG46457.1
S75169.1 AAC60646.1
U01025.1 AAC50154.1
X62741.1 CAA44603.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion SLC39A7 B3GALT4 ATF6B LOC100294145 PSMB8 RXRB ZBTB9 CFB MICB RING1 VWA7 SNORD84 MSH5 RPS18 TAP2 LY6G6C EHMT2 HSPA1L APOM SAPCD1-AS1 WDR46 HLA-DRA C2 MIR6721 C4B SNORD52 SKIV2L CSNK2B NEU1 PBX2 TNXA LOC101929163 LST1 NOTCH4 HSPA1A TAP1 LOC100287329 MIR6832 SNORD117 MIR6834 C6orf10 TNXB MIR5004 ZBTB22 PPP1R2P1 LTA LOC102725068 LSM2 HLA-DQA1 HLA-DOA HSPA1B ATP6V1G2 HCG23 HLA-DQA2 ZBTB12 C6orf47 HSD17B8 LY6G6E MIR1236 HLA-DOB DDX39B-AS1 STK19 KIFC1 AGPAT1 HLA-DQB2 GPANK1 HLA-DPB1 VPS52 TNF LY6G5C HLA-DQB1-AS1 HLA-DQB1 MIR6873 NCR3 MIR6833 FKBPL HLA-DRB6 SNORD48 MIR4646 NFKBIL1 C6orf48 DAXX HLA-DPA1 BAG6 CLIC1 DDAH2 LY6G6F ABHD16A SYNGAP1 PHF1 C4A PRRC2A LOC100507547 CUTA HLA-DMB SAPCD1 BRD2 PSMB8-AS1 ATP6V1G2-DDX39B AGER PFDN6 PSMB9 MIR3135B VARS NELFE COL11A2 CYP21A1P PRRT1 HLA-DRB1 C2-AS1 HLA-DPB2 MSH5-SAPCD1 PPT2-EGFL8 AIF1 DXO LTB LY6G6D CYP21A2 EGFL8 DDX39B C6orf25 HCG24 MCCD1 SLC44A4 HLA-DRB5 TAPBP BTNL2 HLA-DMA HCG26 RNF5 LY6G5B HCP5 SNORA38 RGL2 GPSM3 MIR219A1 PPT2 HCG25
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion SLC39A7 B3GALT4 ATF6B LOC100294145 PSMB8 RXRB ZBTB9 CFB MICB RING1 VWA7 SNORD84 MSH5 RPS18 TAP2 LY6G6C EHMT2 HSPA1L APOM SAPCD1-AS1 WDR46 HLA-DRA C2 MIR6721 C4B SNORD52 SKIV2L CSNK2B NEU1 PBX2 TNXA LOC101929163 LST1 NOTCH4 HSPA1A TAP1 LOC100287329 MIR6832 SNORD117 MIR6834 C6orf10 TNXB MIR5004 ZBTB22 PPP1R2P1 LTA LOC102725068 LSM2 HLA-DQA1 HLA-DOA HSPA1B ATP6V1G2 HCG23 HLA-DQA2 ZBTB12 C6orf47 HSD17B8 LY6G6E MIR1236 HLA-DOB DDX39B-AS1 STK19 KIFC1 AGPAT1 HLA-DQB2 GPANK1 HLA-DPB1 VPS52 TNF LY6G5C HLA-DQB1-AS1 HLA-DQB1 MIR6873 NCR3 MIR6833 FKBPL HLA-DRB6 SNORD48 MIR4646 NFKBIL1 C6orf48 DAXX HLA-DPA1 BAG6 CLIC1 DDAH2 LY6G6F ABHD16A SYNGAP1 PHF1 C4A PRRC2A LOC100507547 CUTA HLA-DMB SAPCD1 BRD2 PSMB8-AS1 ATP6V1G2-DDX39B AGER PFDN6 PSMB9 MIR3135B VARS NELFE COL11A2 CYP21A1P PRRT1 HLA-DRB1 C2-AS1 HLA-DPB2 MSH5-SAPCD1 PPT2-EGFL8 AIF1 DXO LTB LY6G6D CYP21A2 EGFL8 DDX39B C6orf25 HCG24 MCCD1 SLC44A4 HLA-DRB5 TAPBP BTNL2 HLA-DMA HCG26 RNF5 LY6G5B HCP5 SNORA38 RGL2 GPSM3 MIR219A1 PPT2 HCG25
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion HLA-DPB1 VPS52 COL11A2 SLC39A7 B3GALT4 LOC100294145 HLA-DQB1-AS1 TAP1 HLA-DPB2 HLA-DQB1 MIR6873 PSMB8 RXRB MIR6834 ZBTB9 RING1 MIR5004 RPS18 DAXX TAP2 ZBTB22 PPP1R2P1 HLA-DQA1 HLA-DOA HCG24 HLA-DPA1 HLA-DQA2 TAPBP HLA-DMA HSD17B8 SYNGAP1 PHF1 WDR46 RGL2 HLA-DOB MIR219A1 CUTA HLA-DMB BRD2 PSMB8-AS1 PFDN6 KIFC1 PSMB9 MIR3135B HLA-DQB2 HCG25
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss HLA-DMB LOC100294145 BRD2 TAP2 TAP1 PPP1R2P1 PSMB8-AS1 HLA-DMA PSMB8 PSMB9

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