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See other PSMB9 CNV Assays ›
Gene Symbol
PSMB9
Assay Reference Genome
Location

Chr.6:32858385 on build GRCh38
Cytoband
6p21.32
Assay ID Hs00868399_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5698

Gene Name:

 proteasome subunit beta 9

Gene Aliases:

 LMP2, PSMB6i, RING12, beta1i

Location:

 Chr.6:32854161-32859851 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PSMB9 NM_002800.4 NP_002791.1
AK303118.1
BC065513.1 AAH65513.1
BI832878.1
BM998687.1
BX641100.1
CR541656.1 CAG46457.1
S75169.1 AAC60646.1
U01025.1 AAC50154.1
X62741.1 CAA44603.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion PSMB9 PPT2-EGFL8 C4A TNXA ATP6V1G2-DDX39B HLA-DQB2 CUTA HLA-DRB5 HCG25 MCCD1 SNORD84 LSM2 EHMT2 PRRC2A LOC100287329 LTB SLC39A7 SAPCD1 MIR6721 MIR219A1 PRRT1 C6orf48 HLA-DMA SYNGAP1 NELFE TAP2 C2-AS1 LY6G6C DXO COL11A2 MSH5 BTNL2 GPSM3 TNXB CFB NCR3 ZBTB9 RGL2 BRD2 LY6G6E PBX2 HLA-DQB1 PSMB8 MIR5004 HLA-DQA2 DDX39B ZBTB22 LOC101929163 SLC44A4 RNF5 NOTCH4 NFKBIL1 CSNK2B HCG24 STK19 HSPA1L SAPCD1-AS1 HLA-DRB6 RPS18 LOC100294145 MIR6832 HLA-DOB ATF6B HLA-DMB LTA KIFC1 LY6G5C NEU1 SKIV2L HLA-DRB1 VARS HCP5 HLA-DQA1 HLA-DQB1-AS1 DDAH2 HLA-DPB2 C2 HLA-DPA1 CYP21A2 MIR3135B ZBTB12 AGPAT1 C6orf25 ABHD16A DAXX LY6G6D PFDN6 AGER APOM C4B TAPBP PPT2 TNF RING1 DDX39B-AS1 AIF1 HCG23 B3GALT4 SNORD117 C6orf10 CYP21A1P HSD17B8 VPS52 MSH5-SAPCD1 HSPA1A FKBPL PSMB8-AS1 MIR6873 LST1 MICB HLA-DRA LOC100507547 EGFL8 TAP1 LOC102725068 SNORD48 HLA-DOA HSPA1B BAG6 HCG26 GPANK1 PPP1R2P1 VWA7 RXRB MIR1236 LY6G6F CLIC1 WDR46 PHF1 MIR6834 SNORA38 MIR6833 SNORD52 LY6G5B C6orf47 HLA-DPB1 ATP6V1G2 MIR4646
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion PSMB9 PPT2-EGFL8 C4A TNXA ATP6V1G2-DDX39B HLA-DQB2 CUTA HLA-DRB5 HCG25 MCCD1 SNORD84 LSM2 EHMT2 PRRC2A LOC100287329 LTB SLC39A7 SAPCD1 MIR6721 MIR219A1 PRRT1 C6orf48 HLA-DMA SYNGAP1 NELFE TAP2 C2-AS1 LY6G6C DXO COL11A2 MSH5 BTNL2 GPSM3 TNXB CFB NCR3 ZBTB9 RGL2 BRD2 LY6G6E PBX2 HLA-DQB1 PSMB8 MIR5004 HLA-DQA2 DDX39B ZBTB22 LOC101929163 SLC44A4 RNF5 NOTCH4 NFKBIL1 CSNK2B HCG24 STK19 HSPA1L SAPCD1-AS1 HLA-DRB6 RPS18 LOC100294145 MIR6832 HLA-DOB ATF6B HLA-DMB LTA KIFC1 LY6G5C NEU1 SKIV2L HLA-DRB1 VARS HCP5 HLA-DQA1 HLA-DQB1-AS1 DDAH2 HLA-DPB2 C2 HLA-DPA1 CYP21A2 MIR3135B ZBTB12 AGPAT1 C6orf25 ABHD16A DAXX LY6G6D PFDN6 AGER APOM C4B TAPBP PPT2 TNF RING1 DDX39B-AS1 AIF1 HCG23 B3GALT4 SNORD117 C6orf10 CYP21A1P HSD17B8 VPS52 MSH5-SAPCD1 HSPA1A FKBPL PSMB8-AS1 MIR6873 LST1 MICB HLA-DRA LOC100507547 EGFL8 TAP1 LOC102725068 SNORD48 HLA-DOA HSPA1B BAG6 HCG26 GPANK1 PPP1R2P1 VWA7 RXRB MIR1236 LY6G6F CLIC1 WDR46 PHF1 MIR6834 SNORA38 MIR6833 SNORD52 LY6G5B C6orf47 HLA-DPB1 ATP6V1G2 MIR4646
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss PSMB9 PPP1R2P1 LOC100294145 HLA-DMA TAP2 TAP1 BRD2 PSMB8-AS1 PSMB8 HLA-DMB
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion PSMB9 MIR6873 MIR5004 HLA-DQA2 MIR3135B ZBTB22 HLA-DQB2 TAP1 HLA-DOA CUTA HCG25 DAXX HCG24 PPP1R2P1 PFDN6 RXRB TAPBP RING1 SLC39A7 RPS18 MIR219A1 LOC100294145 B3GALT4 HLA-DMA WDR46 SYNGAP1 TAP2 PHF1 COL11A2 MIR6834 HLA-DOB HLA-DMB KIFC1 HLA-DPB1 ZBTB9 HSD17B8 VPS52 HLA-DQA1 RGL2 HLA-DQB1-AS1 BRD2 HLA-DPB2 HLA-DQB1 PSMB8-AS1 PSMB8 HLA-DPA1

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