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See other CHTF18 CNV Assays ›
Gene Symbol
CHTF18
Assay Reference Genome
Location

Chr.16:788732 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00882940_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63922

Gene Name:

 chromosome transmission fidelity factor 18

Gene Aliases:

 C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL

Location:

 Chr.16:788622-798074 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 1 - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHTF18 NM_022092.2 NP_071375.1
XM_005255470.1 XP_005255527.1
XM_005255471.3 XP_005255528.1
XM_011522572.1 XP_011520874.1
XM_017023532.1 XP_016879021.1
XM_017023533.1 XP_016879022.1
XM_017023534.1 XP_016879023.1
AK024476.1 BAB15766.1
AK128869.1
AK293846.1
AK309804.1
BC006278.2 AAH06278.2
BC006437.1 AAH06437.1
BC018184.1 AAH18184.1
DC410609.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain CHTF18 MIR662 MSLN GNG13 RPUSD1 PRR25
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain CHTF18 MIR662 MSLN GNG13 RPUSD1 PRR25
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC105371047 RPL3L SNORA64 IFT140 HS3ST6 PRR35 PDPK1 PDIA2 SNORA78 HBA2 NTN3 HN1L TSR3 LMF1 LOC729652 DDX11L10 SNHG19 WDR24 CHTF18 TPSG1 MSLN SNORD60 FBXL16 LMF1-AS1 LOC107987233 JMJD8 HAGH MIR940 RNF151 WDR90 RAB26 ABCA17P MIR3180-5 HBQ1 SSTR5 SLC9A3R2 CACNA1H PRR25 HBA1 TMEM204 METTL26 RHBDL1 RAB11FIP3 MEIOB LOC105371184 NDUFB10 TPSD1 NHLRC4 LOC652276 SNORA10 TELO2 RPUSD1 PIGQ LOC107984876 HBZ SNRNP25 METRN C16orf91 RHOT2 CLCN7 TPSAB1 NUBP2 LOC101929280 CCDC78 LOC100134368 MIR6511B1 DECR2 PRSS29P MIR6767 UBE2I BRICD5 CRAMP1 KCTD5 MIR4717 NTHL1 AXIN1 LOC105371049 CASKIN1 MLST8 RHBDF1 LINC00235 ABCA3 MCRIP2 BAIAP3 E4F1 SOX8 MIR1225 CCNF FAHD1 PGP MIR6768 NARFL MSRB1 RPL23AP5 MIR3178 LOC105371046 SNHG9 SYNGR3 EME2 MIR3177 FAM234A LOC105371038 ECI1 RAB40C MIR3677 MRPL28 WASIR2 ERVK13-1 NME3 MAPK8IP3 GNG13 C16orf59 RPS2 NME4 TBL3 CEMP1 IGFALS LINC00254 MIR662 LUC7L ARHGDIG MPG TPSB2 HAGHL SPSB3 NPW GFER SSTR5-AS1 FLJ42627 MIR4516 LOC105371045 ATP6V0C MIR3176 PKD1 PRSS27 LOC100287175 MIR5587 AMDHD2 DNASE1L2 TRAF7 CCDC154 STUB1 MIR6859-4 POLR3K ZNF598 NPRL3 NOXO1 LOC106660606 CAPN15 TMEM8A MRPS34 FAM173A TSC2 RGS11 TBC1D24 PTX4 GNPTG RNPS1 C1QTNF8 WFIKKN1 HBM UNKL
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss MIR662 NHLRC4 HAGHL RPUSD1 PIGQ METRN RHOT2 NARFL PRR35 MIR3176 LOC101929280 LOC100287175 MIR5587 CCDC78 STUB1 LOC105371038 WDR24 CHTF18 MSLN RAB40C FBXL16 CAPN15 LOC107987233 JMJD8 WDR90 FAM173A GNG13 LINC00235 PRR25 MCRIP2 METTL26 RHBDL1 RAB11FIP3 WFIKKN1 LOC105371184
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss MIR662 NHLRC4 HAGHL RPUSD1 PIGQ METRN RHOT2 NARFL PRR35 MIR3176 LOC101929280 LOC100287175 MIR5587 CCDC78 STUB1 LOC105371038 WDR24 CHTF18 MSLN RAB40C FBXL16 CAPN15 LOC107987233 JMJD8 WDR90 FAM173A GNG13 LINC00235 PRR25 MCRIP2 METTL26 RHBDL1 RAB11FIP3 WFIKKN1 LOC105371184
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion MIR662 SOX8 NHLRC4 HAGHL RPUSD1 PIGQ LOC107984876 SSTR5-AS1 METRN RHOT2 NARFL PRR35 MIR3176 LOC101929280 LOC100287175 MIR5587 CCDC78 LMF1 STUB1 LOC105371038 WDR24 CHTF18 MSLN RAB40C FBXL16 LMF1-AS1 CAPN15 LOC107987233 JMJD8 WDR90 FAM173A SSTR5 GNG13 LINC00235 PRR25 MCRIP2 METTL26 RHBDL1 RAB11FIP3 C1QTNF8 WFIKKN1 LOC105371184
nsv571042 Chr.16:785298 - 847566 on Build GRCh38 Loss CHTF18 GNG13 RPUSD1 PRR25
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication MIR662 HAGHL RPUSD1 PIGQ METRN RHOT2 NARFL LOC101929280 LOC100287175 CCDC78 STUB1 LOC105371038 WDR24 CHTF18 MSLN RAB40C FBXL16 JMJD8 WDR90 FAM173A GNG13 MCRIP2 METTL26 RHBDL1 WFIKKN1 LOC105371184
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication MIR662 NHLRC4 HAGHL RPUSD1 PIGQ METRN RHOT2 NARFL PRR35 MIR3176 LOC101929280 LOC100287175 MIR5587 CCDC78 STUB1 LOC105371038 WDR24 CHTF18 MSLN RAB40C FBXL16 CAPN15 LOC107987233 JMJD8 WDR90 FAM173A GNG13 LINC00235 PRR25 MCRIP2 METTL26 RHBDL1 RAB11FIP3 WFIKKN1 LOC105371184
nsv571043 Chr.16:787857 - 798755 on Build GRCh38 Loss CHTF18 GNG13 RPUSD1
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss CHTF18 GNG13 RPUSD1 PRR25
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss CHTF18 MIR662 MSLN FBXL16 HAGHL RPUSD1 JMJD8 METRN RHOT2 NARFL WDR90 FAM173A GNG13 LOC100287175 MCRIP2 CCDC78 RHBDL1 STUB1 LOC105371184 LOC105371038 WDR24
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss CHTF18 MIR662 MSLN RPUSD1

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