Hs00884502_cn

• Gene Symbol: CSDC2
• Assay Reference Genome Location: Chr.22:41574991 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 27254
• Gene Name: cold shock domain containing C2
• Gene Aliases: PIPPIN, dJ347H13.2
• Location: Chr.22:41561010-41576666 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSDC2	NM_014460.3	4	855	NP_055275.1
	AB027011.1	3	578	BAA84704.1
	AL834417.1	4	740	CAD39079.2
	CR456457.1	3	590	CAG30343.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	TOB2 TEF PHF5A LOC105373044 ACO2 MIR6889 RANGAP1 POLR3H PMM1 ZC3H7B CSDC2 LOC100996598
nsv1055166	Chr.22:41536399 - 41622240 on Build GRCh38	Gain	LOC105373044 POLR3H PMM1 XRCC6 CSDC2 DESI1
nsv834209	Chr.22:41563516 - 41746056 on Build GRCh38	Loss	C22orf46 MEI1 PMM1 XRCC6 CSDC2 SNU13 DESI1
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	TOB2 ACO2 L3MBTL2 RANGAP1 POLR3H PMM1 XRCC6 ZC3H7B CSDC2 EP300 SNU13 DESI1 TEF PHF5A LOC105373044 CHADL MIR6889 C22orf46 EP300-AS1 MEI1 MIR1281 SNORD140 LOC100996598
nsv3639	Chr.22:41571809 - 41602871 on Build GRCh38	Insertion	PMM1 CSDC2 DESI1
esv3647800	Chr.22:41574227 - 41593225 on Build GRCh38	Gain	PMM1 CSDC2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
mRNA processing

Function(s)

DNA binding
RNA binding
protein binding
transcription factor binding