Hs00903891_cn

• Gene Symbol: MAPKAP1
• Assay Reference Genome Location: Chr.9:125438117 on build GRCh38
• Cytoband: 9q33.3

Target Gene Details

• Entrez Gene ID: 79109
• Gene Name: mitogen-activated protein kinase associated protein 1
• Gene Aliases: JC310, MIP1, SIN1, SIN1b, SIN1g
• Location: Chr.9:125437394-125707234 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MAPKAP1	NM_001006617.1	12	2672	NP_001006618.1
	NM_001006619.1	11	2531	NP_001006620.1
	NM_001006620.1	11	2344	NP_001006621.1
	NM_001006621.1	10	2254	NP_001006622.1
	NM_024117.3	11	2564	NP_077022.1
	XM_011519005.1	13	2813	XP_011517307.1
	XM_011519007.1	12	2672	XP_011517309.1
	XM_017015126.1	12	2561	XP_016870615.1
	AL833042.1	11	2305	CAH56311.1
	AY524429.1	12	2669	AAS90839.1
	AY524431.1	11	2561	AAS90841.1
	AY524432.1	11	2528	AAS90842.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831722	Chr.9:125302099 - 125476079 on Build GRCh38	Gain	GAPVD1 MAPKAP1
nsv1046626	Chr.9:125359313 - 125470470 on Build GRCh38	Gain	GAPVD1 MAPKAP1
nsv515979	Chr.9:125388505 - 125465747 on Build GRCh38	Loss	MAPKAP1

More Information

Additional Information:

For this assay, SNP(s) [rs73668944] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

substantia nigra development
T cell costimulation
negative regulation of Ras protein signal transduction
phosphatidylinositol-mediated signaling

Function(s)

protein binding
phosphatidylinositol-4,5-bisphosphate binding
phosphatidylinositol-3,4,5-trisphosphate binding
Ras GTPase binding
protein kinase binding
phosphatidylinositol-3,4-bisphosphate binding
phosphatidic acid binding
phosphatidylinositol-3,5-bisphosphate binding