Hs00915098_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48030325 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	6	886	NP_062829.1
	XM_017026992.1	8	1087	XP_016882481.1
	AF169159.1	6	879	AAF25793.1
	BC126133.1	6	794
	BC126135.1	6	794
	BQ185108.1	1	390

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	LIG1 C19orf68 PLA2G4C-AS1 PLA2G4C ELSPBP1 BSPH1 CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	PRR12 MIR6799 FLT3LG DKKL1 SNAR-C5 SIGLEC16 MIR5088 GRWD1 CPT1C RASIP1 C19orf73 LMTK3 DBP SNAR-A11 CARD8 TMEM143 LOC101928295 PLA2G4C SNAR-D BSPH1 NUP62 HRC SCAF1 MIR6800 MAMSTR PTOV1-AS1 SNAR-B1 LOC100287477 IZUMO1 SNAR-A9 SNAR-G2 SPACA4 MIR6798 MED25 CCDC114 PTOV1-AS2 CARD8-AS1 MIR4751 EMP3 FGF21 SNRNP70 CGB7 ALDH16A1 BAX FUT2 PTH2 SIGLEC11 SNORD35B KCNA7 SNORD34 LOC105372430 PTOV1 ZNF114 MIR4750 SNAR-A1 SNAR-A3 PRMT1 GRIN2D SNAR-C3 BCL2L12 SNAR-A8 RPS11 KDELR1 RPL13A SNAR-A2 SNAR-C2 SNORD35A VRK3 TRPM4 MIR4749 FUT1 TEAD2 SNAR-A6 CGB3 IL4I1 PNKP GYS1 PRRG2 SNAR-G1 CGB2 SNAR-A14 CYTH2 SYNGR4 DHDH CABP5 CA11 SEC1P SNAR-A10 AKT1S1 C19orf68 SPHK2 RUVBL2 PLA2G4C-AS1 PIH1D1 TBC1D17 RCN3 CGB5 PLEKHA4 NUCB1-AS1 SNAR-A12 RPL18 SULT2B1 NTF4 NUCB1 SNORD32A FLJ26850 ADM5 AP2A1 HSD17B14 PPP1R15A NOSIP LHB RRAS SLC17A7 CCDC155 FAM83E MIR150 SLC6A16 SNAR-A13 SNAR-A7 SNAR-A4 FTL ATF5 SNORD33 TSKS IRF3 BCAT2 GFY SNAR-A5 FCGRT SNAR-B2 CGB8 KCNJ14 MIR4324 NTN5 SNAR-C1 LIG1 CGB1 LOC101059948 LIN7B ZNF473 SNAR-C4 CD37 TULP2 PPFIA3 ELSPBP1 FUZ LOC105447645
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	LIG1 CARD8 C19orf68 CCDC114 TMEM143 CARD8-AS1 PLA2G4C-AS1 EMP3 PLA2G4C ZNF114 GRIN2D SYNGR4 KDELR1 ELSPBP1 CABP5
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C-AS1 PLA2G4C ELSPBP1 CABP5
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 PLA2G4C ELSPBP1 CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-A13 SNAR-C1 SNAR-A1 BSPH1 SNAR-A3 SNAR-A12 SNAR-C5 SNAR-C3 LINC01595 SNAR-C4 CRX TPRX1 SULT2A1 ELSPBP1 SNAR-A2 SNAR-C2 CABP5
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	ELSPBP1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 PLA2G4C ELSPBP1 CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-A13 SNAR-C1 PLA2G4C-AS1 PLA2G4C SNAR-A1 BSPH1 SNAR-A3 SNAR-A12 SNAR-C5 SNAR-C3 LINC01595 SNAR-C4 CRX TPRX1 SULT2A1 ELSPBP1 SNAR-A2 SNAR-C2 CABP5

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding