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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:287777 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00917009_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Within Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 11 3323 NP_003493.1
NM_181050.2 10 3215 NP_851393.1
NR_134879.1 9 3118
XM_011522682.2 11 3349 XP_011520984.1
XM_011522683.2 10 3240 XP_011520985.1
XM_011522684.2 11 3199 XP_011520986.1
XM_011522686.1 10 2106 XP_011520988.1
XM_017023743.1 11 3334 XP_016879232.1
XM_017023744.1 10 3225 XP_016879233.1
XM_017023745.1 10 2374 XP_016879234.1
XM_017023746.1 10 2950 XP_016879235.1
AB208876.1 8 6004 BAD92113.1
AF009674.1 11 3049 AAC51624.1
BC017447.1 6 1525 AAH17447.1
BC044648.1 10 2987 AAH44648.1
BX648449.1 2 1451
KF615847.1 11 2294
KF615848.1 10 2186
KF615849.1 7 1810
KF615850.1 3 1739
KF615851.1 6 2142
KF615852.1 9 3118
KF615853.1 6 1192
KF615854.1 6 1039

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NTN3 TBC1D24 MIR6768 SNHG19 HBM MIR1225 WDR24 CASKIN1 LMF1-AS1 GNG13 RNPS1 LUC7L PKD1 MIR3677 GNPTG MCRIP2 RPL3L RHBDL1 TELO2 PRR35 POLR3K BRICD5 MEIOB IFT140 CCNF LINC00254 MRPS34 CHTF18 MIR6767 HBA1 FAM234A TSR3 DDX11L10 MSLN ABCA17P ECI1 HN1L CLCN7 JMJD8 PDPK1 TPSB2 LOC105371047 RAB40C TPSAB1 CCDC154 HBQ1 DECR2 MIR6859-4 TMEM204 ERVK13-1 FBXL16 AMDHD2 MIR4717 ZNF598 NUBP2 KCTD5 SOX8 NPRL3 SNRNP25 RAB11FIP3 UNKL SNORD60 LMF1 DNASE1L2 TRAF7 MSRB1 IGFALS WDR90 LOC652276 NME3 TPSG1 LOC105371045 RPUSD1 NARFL MAPK8IP3 TSC2 CAPN15 E4F1 NPW PGP SLC9A3R2 LOC107987233 MIR6511B1 MIR3177 SNORA64 RNF151 HBA2 MIR940 MIR662 C16orf91 METTL26 C1QTNF8 PRSS29P SSTR5 RHBDF1 LOC101929280 CRAMP1 HAGH RHOT2 WASIR2 NHLRC4 RAB26 PRR25 SNORA10 FLJ42627 FAM173A PTX4 CEMP1 RPS2 SNORA78 LOC105371184 C16orf59 PDIA2 SSTR5-AS1 METRN LOC100287175 MLST8 MIR5587 SNHG9 CCDC78 PIGQ FAHD1 HBZ NDUFB10 GFER MRPL28 STUB1 NME4 WFIKKN1 BAIAP3 UBE2I EME2 LOC106660606 NOXO1 ABCA3 ATP6V0C HAGHL CACNA1H LOC105371038 TMEM8A MIR3180-5 SPSB3 RGS11 ARHGDIG LOC105371046 TPSD1 HS3ST6 AXIN1 NTHL1 SYNGR3 LINC00235 LOC107984876 MIR4516 MIR3176 LOC100134368 LOC729652 RPL23AP5 PRSS27 MPG TBL3 LOC105371049 MIR3178
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion PDIA2 AXIN1 RGS11 ARHGDIG
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain FAM234A MRPL28 PDIA2 AXIN1 NME4 TMEM8A RAB11FIP3 DECR2 RGS11 LOC100134368 RPL23AP5 ARHGDIG
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss PDIA2 AXIN1 ARHGDIG
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain FAM234A PDIA2 AXIN1 RGS11 ARHGDIG
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss PDIA2 AXIN1 RGS11 ARHGDIG
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss FAM234A MRPL28 PDIA2 AXIN1 NME4 TMEM8A RAB11FIP3 DECR2 RGS11 LOC100134368 RPL23AP5 ARHGDIG

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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