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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:287777 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00917009_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Within Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 11 3323 NP_003493.1
NM_181050.2 10 3215 NP_851393.1
NR_134879.1 9 3118
XM_011522682.2 11 3349 XP_011520984.1
XM_011522683.2 10 3240 XP_011520985.1
XM_011522684.2 11 3199 XP_011520986.1
XM_011522686.1 10 2106 XP_011520988.1
XM_017023743.1 11 3334 XP_016879232.1
XM_017023744.1 10 3225 XP_016879233.1
XM_017023745.1 10 2374 XP_016879234.1
XM_017023746.1 10 2950 XP_016879235.1
AB208876.1 8 6004 BAD92113.1
AF009674.1 11 3049 AAC51624.1
BC017447.1 6 1525 AAH17447.1
BC044648.1 10 2987 AAH44648.1
BX648449.1 2 1451
KF615847.1 11 2294
KF615848.1 10 2186
KF615849.1 7 1810
KF615850.1 3 1739
KF615851.1 6 2142
KF615852.1 9 3118
KF615853.1 6 1192
KF615854.1 6 1039

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RAB26 RPUSD1 MIR5587 FLJ42627 TPSB2 TBL3 LMF1-AS1 MIR6768 NHLRC4 SLC9A3R2 DDX11L10 PRSS29P TSC2 DECR2 LOC106660606 RNF151 ABCA3 CRAMP1 DNASE1L2 MIR3178 PRR35 SOX8 RPL3L MLST8 SNHG9 ERVK13-1 CLCN7 FAM234A MRPS34 MIR3177 LMF1 C1QTNF8 SNORD60 RAB40C AXIN1 CHTF18 TMEM204 GNPTG CAPN15 IGFALS MAPK8IP3 PRR25 IFT140 C16orf91 WFIKKN1 TRAF7 SYNGR3 MSRB1 POLR3K FAM173A RHBDF1 STUB1 AMDHD2 LOC652276 ARHGDIG LOC107987233 HBZ MIR3176 JMJD8 NME4 NTHL1 KCTD5 MIR6511B1 GNG13 MIR1225 LOC101929280 PDPK1 HN1L WASIR2 TMEM8A SNORA10 NME3 LOC105371038 TPSG1 MCRIP2 HAGH ECI1 SNHG19 CEMP1 TPSD1 PDIA2 HS3ST6 SNORA64 PKD1 PIGQ RNPS1 METTL26 CACNA1H BRICD5 MPG WDR90 SNRNP25 EME2 MIR4516 MSLN MIR6767 RPS2 LOC105371047 RAB11FIP3 E4F1 ABCA17P SSTR5 RGS11 ZNF598 NARFL MIR940 MEIOB LOC100134368 RHBDL1 METRN SNORA78 MIR662 LOC105371184 HBM TPSAB1 NOXO1 SSTR5-AS1 LOC729652 RPL23AP5 PTX4 LOC105371046 PRSS27 MRPL28 LOC105371045 NDUFB10 PGP UNKL HBQ1 LINC00254 WDR24 TELO2 FBXL16 ATP6V0C HAGHL C16orf59 LINC00235 SPSB3 TSR3 MIR6859-4 CCNF CCDC154 MIR3180-5 HBA1 RHOT2 CASKIN1 NUBP2 LOC105371049 HBA2 FAHD1 LUC7L TBC1D24 GFER CCDC78 UBE2I NTN3 NPW LOC100287175 LOC107984876 NPRL3 BAIAP3 MIR3677 MIR4717
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain ARHGDIG RPL23AP5 DECR2 TMEM8A LOC100134368 FAM234A RAB11FIP3 NME4 MRPL28 PDIA2 RGS11 AXIN1
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion ARHGDIG PDIA2 RGS11 AXIN1
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss ARHGDIG PDIA2 AXIN1
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain ARHGDIG FAM234A PDIA2 RGS11 AXIN1
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss ARHGDIG PDIA2 RGS11 AXIN1
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss ARHGDIG RPL23AP5 DECR2 TMEM8A LOC100134368 FAM234A RAB11FIP3 NME4 MRPL28 PDIA2 RGS11 AXIN1

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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