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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31658520 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00924760_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 2253 NP_067007.3
AJ245433.1 1 2214 CAB51603.1
BC012950.1 1 2253 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion MICB MSH5-SAPCD1 LY6G5B CLIC1 HSPA1L AGPAT1 TNF GPANK1 LST1 VWA7 ATP6V1G2 NOTCH4 LOC100287329 MIR6833 HSPA1A CYP21A1P AGER NCR3 BTNL2 MIR6721 HLA-DRB1 GPSM3 SNORA38 LTB SNORD52 NEU1 DDX39B LY6G5C DXO CYP21A2 HCG23 HLA-DRA APOM C6orf47 DDX39B-AS1 HSPA1B SNORD84 C2-AS1 CSNK2B BAG6 MIR6832 SAPCD1-AS1 LSM2 C2 HLA-DRB6 ABHD16A STK19 PRRT1 C6orf25 HCG26 LTA TNXB NFKBIL1 LY6G6F NELFE FKBPL LOC102725068 C6orf10 ZBTB12 HLA-DRB5 RNF5 C4A VARS ATF6B SNORD48 SLC44A4 AIF1 DDAH2 LOC100507547 LOC101929163 SNORD117 PPT2-EGFL8 CFB SKIV2L LY6G6E EHMT2 PPT2 LY6G6D PRRC2A C4B HCP5 SAPCD1 PBX2 ATP6V1G2-DDX39B EGFL8 MIR4646 MSH5 TNXA C6orf48 LY6G6C MCCD1 MIR1236
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss SNORA38 AIF1 BAG6 MIR6832 GPANK1 APOM C6orf47 PRRC2A
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss MICB MSH5-SAPCD1 LY6G5B CLIC1 HSPA1L TNF GPANK1 LST1 VWA7 ATP6V1G2 LOC100287329 HSPA1A CYP21A1P NCR3 SNORA38 LTB SNORD52 NEU1 DDX39B LY6G5C DXO CYP21A2 APOM C6orf47 DDX39B-AS1 HSPA1B SNORD84 C2-AS1 CSNK2B BAG6 MIR6832 SAPCD1-AS1 LSM2 C2 ABHD16A STK19 C6orf25 HCG26 LTA TNXB NFKBIL1 LY6G6F NELFE LOC102725068 MICA ZBTB12 C4A VARS SNORD48 MIR6891 SLC44A4 AIF1 DDAH2 SNORD117 CFB SKIV2L LY6G6E EHMT2 LY6G6D PRRC2A C4B HCP5 HLA-B SAPCD1 ATP6V1G2-DDX39B MIR4646 MSH5 TNXA C6orf48 LY6G6C MCCD1 MIR1236
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion COL11A2 LY6G5B CLIC1 HSPA1L PSMB8-AS1 VPS52 TNF LST1 VWA7 LOC100287329 MIR6833 HSPA1A PSMB8 NCR3 HLA-DRB1 HCG24 RGL2 SNORA38 LTB NEU1 HLA-DQA2 PSMB9 DDX39B DXO CYP21A2 HCG23 APOM C6orf47 BRD2 HSPA1B SNORD84 LOC100294145 HLA-DOB CSNK2B MIR6832 HLA-DOA SAPCD1-AS1 MIR6873 LSM2 C2 ABHD16A STK19 HCG26 MIR5004 HLA-DPB1 LTA TNXB NFKBIL1 LY6G6F HLA-DQB1-AS1 SYNGAP1 CUTA FKBPL C6orf10 ATF6B SNORD48 SLC44A4 LOC101929163 SKIV2L HLA-DMB PRRC2A MIR6834 SAPCD1 ATP6V1G2-DDX39B HLA-DMA TNXA C6orf48 MCCD1 MIR1236 MICB MSH5-SAPCD1 TAP1 AGPAT1 DAXX GPANK1 HSD17B8 ATP6V1G2 NOTCH4 CYP21A1P AGER BTNL2 MIR6721 ZBTB9 HLA-DPA1 GPSM3 SNORD52 MIR219A1 LY6G5C MIR3135B PFDN6 HLA-DQB2 PHF1 HLA-DPB2 HLA-DRA KIFC1 DDX39B-AS1 RING1 C2-AS1 HLA-DQB1 BAG6 RPS18 HLA-DRB6 SLC39A7 ZBTB22 RXRB PRRT1 C6orf25 WDR46 PPP1R2P1 NELFE TAPBP LOC102725068 HLA-DQA1 ZBTB12 HLA-DRB5 RNF5 C4A VARS AIF1 DDAH2 LOC100507547 SNORD117 PPT2-EGFL8 CFB LY6G6E EHMT2 PPT2 LY6G6D HCG25 TAP2 B3GALT4 C4B HCP5 PBX2 EGFL8 MIR4646 MSH5 LY6G6C
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion COL11A2 LY6G5B CLIC1 HSPA1L PSMB8-AS1 VPS52 TNF LST1 VWA7 LOC100287329 MIR6833 HSPA1A PSMB8 NCR3 HLA-DRB1 HCG24 RGL2 SNORA38 LTB NEU1 HLA-DQA2 PSMB9 DDX39B DXO CYP21A2 HCG23 APOM C6orf47 BRD2 HSPA1B SNORD84 LOC100294145 HLA-DOB CSNK2B MIR6832 HLA-DOA SAPCD1-AS1 MIR6873 LSM2 C2 ABHD16A STK19 HCG26 MIR5004 HLA-DPB1 LTA TNXB NFKBIL1 LY6G6F HLA-DQB1-AS1 SYNGAP1 CUTA FKBPL C6orf10 ATF6B SNORD48 SLC44A4 LOC101929163 SKIV2L HLA-DMB PRRC2A MIR6834 SAPCD1 ATP6V1G2-DDX39B HLA-DMA TNXA C6orf48 MCCD1 MIR1236 MICB MSH5-SAPCD1 TAP1 AGPAT1 DAXX GPANK1 HSD17B8 ATP6V1G2 NOTCH4 CYP21A1P AGER BTNL2 MIR6721 ZBTB9 HLA-DPA1 GPSM3 SNORD52 MIR219A1 LY6G5C MIR3135B PFDN6 HLA-DQB2 PHF1 HLA-DPB2 HLA-DRA KIFC1 DDX39B-AS1 RING1 C2-AS1 HLA-DQB1 BAG6 RPS18 HLA-DRB6 SLC39A7 ZBTB22 RXRB PRRT1 C6orf25 WDR46 PPP1R2P1 NELFE TAPBP LOC102725068 HLA-DQA1 ZBTB12 HLA-DRB5 RNF5 C4A VARS AIF1 DDAH2 LOC100507547 SNORD117 PPT2-EGFL8 CFB LY6G6E EHMT2 PPT2 LY6G6D HCG25 TAP2 B3GALT4 C4B HCP5 PBX2 EGFL8 MIR4646 MSH5 LY6G6C
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss MICB MSH5-SAPCD1 LY6G5B CLIC1 HSPA1L AGPAT1 TNF GPANK1 LST1 VWA7 ATP6V1G2 NOTCH4 LOC100287329 MIR6833 HSPA1A CYP21A1P AGER NCR3 BTNL2 MIR6721 GPSM3 SNORA38 LTB SNORD52 NEU1 DDX39B LY6G5C DXO CYP21A2 HCG23 HLA-DRA APOM C6orf47 DDX39B-AS1 HSPA1B SNORD84 C2-AS1 CSNK2B BAG6 MIR6832 SAPCD1-AS1 LSM2 C2 ABHD16A STK19 PRRT1 C6orf25 HCG26 LTA TNXB NFKBIL1 LY6G6F NELFE FKBPL LOC102725068 C6orf10 MICA ZBTB12 RNF5 C4A VARS ATF6B SNORD48 MIR6891 SLC44A4 AIF1 DDAH2 LOC100507547 LOC101929163 SNORD117 PPT2-EGFL8 CFB SKIV2L LY6G6E EHMT2 PPT2 LY6G6D PRRC2A C4B HCP5 HLA-B SAPCD1 PBX2 ATP6V1G2-DDX39B EGFL8 MIR4646 MSH5 TNXA C6orf48 LY6G6C MCCD1 MIR1236
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion SNORA38 ABHD16A LY6G5B AIF1 LY6G5C LY6G6E GPANK1 APOM C6orf47 PRRC2A LY6G6F CSNK2B BAG6 MIR6832 MIR4646
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss ABHD16A LY6G5B TNF LTA GPANK1 LST1 NFKBIL1 ATP6V1G2 LOC100287329 NCR3 SNORA38 LTB AIF1 DDX39B SNORD117 LY6G5C APOM C6orf47 PRRC2A DDX39B-AS1 SNORD84 CSNK2B BAG6 MIR6832 ATP6V1G2-DDX39B MCCD1

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