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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31658520 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00924760_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 2253 NP_067007.3
AJ245433.1 1 2214 CAB51603.1
BC012950.1 1 2253 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv462871 Chr.6:31607499 - 31664357 on Build GRCh38 Loss BAG6 AIF1 MIR6832 C6orf47 SNORA38 APOM PRRC2A GPANK1
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion AIF1 CYP21A2 LOC100287329 MCCD1 LY6G6C HLA-DRA SAPCD1-AS1 BTNL2 ATF6B LOC101929163 DDX39B-AS1 CSNK2B NOTCH4 SNORA38 LOC100507547 SNORD117 PRRT1 MIR6832 C6orf47 TNXB NELFE C6orf25 RNF5 HSPA1A LY6G6F ZBTB12 MICB C6orf10 C4A LY6G5C APOM LOC102725068 SNORD84 TNXA C2 SNORD52 TNF PPT2 DDX39B MSH5-SAPCD1 LTB AGER MIR1236 MIR6721 CYP21A1P MIR4646 FKBPL MIR6833 LY6G6E DXO ATP6V1G2 HCP5 HLA-DRB6 NFKBIL1 LY6G5B C2-AS1 SKIV2L NEU1 HSPA1B STK19 SAPCD1 PRRC2A LY6G6D DDAH2 CFB VWA7 HCG23 AGPAT1 C6orf48 HCG26 VARS GPSM3 SLC44A4 LST1 ABHD16A BAG6 PBX2 C4B SNORD48 EHMT2 LSM2 MSH5 CLIC1 PPT2-EGFL8 HSPA1L HLA-DRB5 NCR3 ATP6V1G2-DDX39B EGFL8 LTA GPANK1 HLA-DRB1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion AIF1 CYP21A2 RPS18 LY6G6C BTNL2 DAXX PSMB8-AS1 SNORA38 MIR219A1 SYNGAP1 LOC100507547 SNORD117 HLA-DMB PHF1 HCG25 HLA-DPA1 MIR6832 C6orf47 MIR6834 TNXB HCG24 NELFE C6orf25 HLA-DQA2 HLA-DQB1 BRD2 C6orf10 C4A HSD17B8 WDR46 B3GALT4 APOM HLA-DPB1 LOC102725068 SNORD84 C2 SNORD52 TNF DDX39B LTB RGL2 MIR6721 MIR4646 PPP1R2P1 MIR6833 RING1 DXO NFKBIL1 STK19 CUTA LY6G6D CFB HCG23 AGPAT1 HCG26 VARS SLC44A4 TAP1 LST1 ABHD16A LSM2 MSH5 CLIC1 HSPA1L NCR3 ZBTB22 EGFL8 HLA-DPB2 PSMB9 LTA HLA-DRB1 LOC100287329 SLC39A7 MCCD1 PFDN6 HLA-DRA SAPCD1-AS1 ATF6B LOC101929163 DDX39B-AS1 CSNK2B NOTCH4 PRRT1 RNF5 HSPA1A LY6G6F ZBTB12 MICB TAPBP HLA-DQB1-AS1 LOC100294145 LY6G5C MIR5004 MIR3135B TNXA COL11A2 PPT2 MSH5-SAPCD1 PSMB8 HLA-DQB2 AGER MIR1236 CYP21A1P FKBPL HLA-DMA LY6G6E ATP6V1G2 HCP5 HLA-DQA1 VPS52 HLA-DRB6 LY6G5B C2-AS1 SKIV2L NEU1 HSPA1B RXRB SAPCD1 PRRC2A DDAH2 VWA7 MIR6873 C6orf48 KIFC1 TAP2 GPSM3 BAG6 PBX2 C4B SNORD48 EHMT2 PPT2-EGFL8 HLA-DOA HLA-DOB HLA-DRB5 ATP6V1G2-DDX39B ZBTB9 GPANK1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss MICA AIF1 CYP21A2 LOC100287329 MCCD1 LY6G6C SAPCD1-AS1 DDX39B-AS1 CSNK2B SNORA38 SNORD117 MIR6832 C6orf47 TNXB NELFE HLA-B C6orf25 HSPA1A LY6G6F ZBTB12 MICB C4A LY6G5C APOM LOC102725068 SNORD84 TNXA C2 SNORD52 TNF DDX39B MSH5-SAPCD1 LTB MIR1236 CYP21A1P MIR4646 LY6G6E DXO ATP6V1G2 HCP5 NFKBIL1 LY6G5B C2-AS1 SKIV2L NEU1 HSPA1B STK19 SAPCD1 PRRC2A LY6G6D DDAH2 CFB VWA7 C6orf48 HCG26 VARS SLC44A4 LST1 ABHD16A BAG6 C4B SNORD48 EHMT2 LSM2 MSH5 CLIC1 HSPA1L NCR3 MIR6891 ATP6V1G2-DDX39B LTA GPANK1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion AIF1 CYP21A2 RPS18 LY6G6C BTNL2 DAXX PSMB8-AS1 SNORA38 MIR219A1 SYNGAP1 LOC100507547 SNORD117 HLA-DMB PHF1 HCG25 HLA-DPA1 MIR6832 C6orf47 MIR6834 TNXB HCG24 NELFE C6orf25 HLA-DQA2 HLA-DQB1 BRD2 C6orf10 C4A HSD17B8 WDR46 B3GALT4 APOM HLA-DPB1 LOC102725068 SNORD84 C2 SNORD52 TNF DDX39B LTB RGL2 MIR6721 MIR4646 PPP1R2P1 MIR6833 RING1 DXO NFKBIL1 STK19 CUTA LY6G6D CFB HCG23 AGPAT1 HCG26 VARS SLC44A4 TAP1 LST1 ABHD16A LSM2 MSH5 CLIC1 HSPA1L NCR3 ZBTB22 EGFL8 HLA-DPB2 PSMB9 LTA HLA-DRB1 LOC100287329 SLC39A7 MCCD1 PFDN6 HLA-DRA SAPCD1-AS1 ATF6B LOC101929163 DDX39B-AS1 CSNK2B NOTCH4 PRRT1 RNF5 HSPA1A LY6G6F ZBTB12 MICB TAPBP HLA-DQB1-AS1 LOC100294145 LY6G5C MIR5004 MIR3135B TNXA COL11A2 PPT2 MSH5-SAPCD1 PSMB8 HLA-DQB2 AGER MIR1236 CYP21A1P FKBPL HLA-DMA LY6G6E ATP6V1G2 HCP5 HLA-DQA1 VPS52 HLA-DRB6 LY6G5B C2-AS1 SKIV2L NEU1 HSPA1B RXRB SAPCD1 PRRC2A DDAH2 VWA7 MIR6873 C6orf48 KIFC1 TAP2 GPSM3 BAG6 PBX2 C4B SNORD48 EHMT2 PPT2-EGFL8 HLA-DOA HLA-DOB HLA-DRB5 ATP6V1G2-DDX39B ZBTB9 GPANK1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss MICA AIF1 CYP21A2 LOC100287329 MCCD1 LY6G6C HLA-DRA SAPCD1-AS1 BTNL2 ATF6B LOC101929163 DDX39B-AS1 CSNK2B NOTCH4 SNORA38 LOC100507547 SNORD117 PRRT1 MIR6832 C6orf47 TNXB NELFE HLA-B C6orf25 RNF5 HSPA1A LY6G6F ZBTB12 MICB C6orf10 C4A LY6G5C APOM LOC102725068 SNORD84 TNXA C2 SNORD52 TNF PPT2 DDX39B MSH5-SAPCD1 LTB AGER MIR1236 MIR6721 CYP21A1P MIR4646 FKBPL MIR6833 LY6G6E DXO ATP6V1G2 HCP5 NFKBIL1 LY6G5B C2-AS1 SKIV2L NEU1 HSPA1B STK19 SAPCD1 PRRC2A LY6G6D DDAH2 CFB VWA7 HCG23 AGPAT1 C6orf48 HCG26 VARS GPSM3 SLC44A4 LST1 ABHD16A BAG6 PBX2 C4B SNORD48 EHMT2 LSM2 MSH5 CLIC1 PPT2-EGFL8 HSPA1L NCR3 MIR6891 ATP6V1G2-DDX39B EGFL8 LTA GPANK1
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion AIF1 MIR6832 C6orf47 MIR4646 LY6G6E LY6G6F ABHD16A BAG6 CSNK2B LY6G5B SNORA38 LY6G5C APOM PRRC2A GPANK1
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss DDX39B AIF1 LTB LOC100287329 MCCD1 ATP6V1G2 DDX39B-AS1 NFKBIL1 CSNK2B LY6G5B SNORA38 PRRC2A SNORD117 MIR6832 C6orf47 LST1 ABHD16A BAG6 LY6G5C APOM NCR3 ATP6V1G2-DDX39B SNORD84 TNF LTA GPANK1

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