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See other RTEL1 CNV Assays ›
Gene Symbol
RTEL1
Assay Reference Genome
Location

Chr.20:63662855 on build GRCh38
Cytoband
20q13.33
Assay ID Hs00978523_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51750

Gene Name:

 regulator of telomere elongation helicase 1

Gene Aliases:

 C20orf41, DKCA4, DKCB5, NHL, PFBMFT3, RTEL

Location:

 Chr.20:63657810-63696253 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1 NM_001283009.1 NP_001269938.1
NM_001283010.1 NP_001269939.1
NM_016434.3 NP_057518.1
NM_032957.4 NP_116575.3
AF217795.1 AAF33687.1
AK299332.1
AK302508.1
AK304798.1
JX119186.1

Target Gene Details

Entrez Gene ID:

 100533107

Gene Name:

 RTEL1-TNFRSF6B readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.20:63657810-63698698 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1-TNFRSF6B NR_037882.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion LIME1 SLC2A4RG ZBTB46-AS1 ZBTB46 TNFRSF6B RTEL1-TNFRSF6B RTEL1 ZGPAT ARFRP1 STMN3
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion LIME1 SLC2A4RG ZBTB46 TNFRSF6B RTEL1-TNFRSF6B RTEL1 ZGPAT ARFRP1 STMN3
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss MIR941-2 LOC100505771 MIR941-1 MIR647 ZNF512B ZGPAT RGS19 PRPF6 LKAAEAR1 ABHD16B UCKL1 SAMD10 MIR6813 C20orf181 PCMTD2 MIR941-3 RTEL1-TNFRSF6B RTEL1 LINC00266-1 MIR1914 LIME1 ZBTB46-AS1 ZBTB46 MIR941-5 NPBWR2 LINC00176 UCKL1-AS1 GMEB2 MIR941-4 SLC2A4RG DNAJC5 TCEA2 MYT1 TPD52L2 TNFRSF6B OPRL1 ARFRP1 STMN3 SOX18
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss LIME1 LOC100505771 FNDC11 ZBTB46 ZGPAT GMEB2 SLC2A4RG PPDPF TNFRSF6B RTEL1-TNFRSF6B RTEL1 EEF1A2 ARFRP1 STMN3 HELZ2 PTK6 SRMS
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss LIME1 LOC100505771 FNDC11 ZBTB46 ZGPAT GMEB2 SLC2A4RG PPDPF TNFRSF6B RTEL1-TNFRSF6B RTEL1 EEF1A2 KCNQ2 ARFRP1 STMN3 HELZ2 PTK6 SRMS

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