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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2043614 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00979890_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ABCA3 MIR3180-5 MIR3178 NME4 HAGH LOC107984876 RPS2 CRAMP1 NHLRC4 LOC105371049 TBL3 NME3 CCNF FBXL16 STUB1 SNORA64 SNHG9 BAIAP3 NARFL SNORA78 LMF1 TSC2 METTL26 NTN3 NPW MCRIP2 LINC00254 MSLN HN1L SLC9A3R2 IGFALS RPL23AP5 PTX4 WDR24 CASKIN1 MIR3176 LUC7L JMJD8 ECI1 MRPL28 MIR1225 HBQ1 CEMP1 POLR3K LOC652276 MIR6768 MIR4717 PRR35 BRICD5 CAPN15 DDX11L10 TSR3 PKD1 RHBDL1 CCDC78 RPUSD1 RAB11FIP3 WASIR2 ATP6V0C AXIN1 MPG HBZ PGP KCTD5 RNF151 LOC106660606 MIR662 ABCA17P LOC105371045 NPRL3 CCDC154 LOC105371046 ZNF598 FAM234A NDUFB10 PRR25 HBA1 LOC105371038 MLST8 TPSD1 MIR6767 CACNA1H TPSB2 PRSS27 DECR2 MIR4516 EME2 TMEM204 C16orf59 MIR6511B1 E4F1 C1QTNF8 LMF1-AS1 MIR3677 LOC107987233 RPL3L FAHD1 DNASE1L2 LOC105371047 PRSS29P HS3ST6 CHTF18 LOC100287175 C16orf91 RGS11 METRN RAB26 SNHG19 LINC00235 PDPK1 SYNGR3 GFER HAGHL RAB40C RNPS1 LOC101929280 FLJ42627 SPSB3 ARHGDIG NUBP2 MIR940 SSTR5-AS1 GNG13 LOC105371184 CLCN7 UNKL UBE2I MIR6859-4 LOC729652 MSRB1 RHBDF1 SNORA10 MIR3177 SNRNP25 MIR5587 ERVK13-1 AMDHD2 MAPK8IP3 TPSG1 SOX8 IFT140 PIGQ HBM WDR90 SSTR5 TMEM8A RHOT2 NOXO1 PDIA2 FAM173A HBA2 LOC100134368 TELO2 TPSAB1 MEIOB SNORD60 GNPTG NTHL1 WFIKKN1 TBC1D24 TRAF7 MRPS34
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss GFER MIR4717 RNPS1 MLST8 BRICD5 ABCA3 MIR3180-5 MIR940 PKD1 LOC105371049 TBL3 MIR4516 MIR6511B1 E4F1 MIR3677 TSC2 PGP DNASE1L2 NPW SLC9A3R2 NOXO1 CASKIN1 LOC106660606 SNORD60 RAB26 ECI1 SNHG19 ZNF598 MIR1225 NTHL1 TRAF7 SYNGR3
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion GFER SNORA78 TSC2 RPL3L NPW HS3ST6 PKD1 SLC9A3R2 RPS2 RNF151 NOXO1 LOC105371049 TBL3 MSRB1 MIR4516 SNORA10 ZNF598 MIR1225 SNORA64 NTHL1 SNHG9 NDUFB10 SYNGR3 MIR6511B1
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion GFER SNORA78 TSC2 NPW PKD1 SLC9A3R2 RPS2 RNF151 NOXO1 LOC105371049 TBL3 SNORA10 ZNF598 MIR1225 SNORA64 NTHL1 SNHG9 NDUFB10 SYNGR3 MIR6511B1

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