Hs00992885_cn

• Gene Symbol: FAM3A
• Assay Reference Genome Location: Chr.X:154515922 on build GRCh38
• Cytoband: Xq28

Target Gene Details

• Entrez Gene ID: 60343
• Gene Name: family with sequence similarity 3 member A
• Gene Aliases: 2.19, DLD, DXS560S, XAP-7
• Location: Chr.X:154506159-154516249 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM3A	NM_001171132.2			NP_001164603.1
	NM_001171133.2			NP_001164604.1
	NM_001171134.2	1	321	NP_001164605.1
	NM_001282311.1	1	321	NP_001269240.1
	NM_001282312.1			NP_001269241.1
	NM_021806.3	1	321	NP_068578.2
	XM_005274714.3			XP_005274771.1
	XM_005274716.3			XP_005274773.1
	XM_005277879.4			XP_005277936.1
	XM_006724831.2			XP_006724894.1
	XM_006724832.3			XP_006724895.1
	XM_006724833.2			XP_006724896.1
	XM_006724834.2	1	229	XP_006724897.1
	XM_017029699.1	1	328	XP_016885188.1
	XM_017029700.1	1	327	XP_016885189.1
	XM_017029701.1			XP_016885190.1
	AK024601.1
	AK057945.1
	AK294116.1	1	284
	AK314682.1	1	239
	AL539139.3	1	321
	BC002934.1	1	225	AAH02934.1
	BC008912.2			AAH08912.1
	BM457676.1
	CX867071.1
	X87193.1	1	128	CAA60645.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv33784	Chr.X:153962665 - 155699588 on Build GRCh38	Gain+Loss	TKTL1 HCFC1-AS1 LOC101927830 RAB39B SNORA70 CTAG2 MIR1184-2 OPN1LW SPRY3 CMC4 SLC10A3 CTAG1B G6PD OPN1MW FLNA OPN1MW2 IRAK1 IKBKG CH17-340M24.3 TAZ FAM223A VBP1 MIR1184-3 SMIM9 PLXNA3 TMLHE-AS1 DKC1 F8A3 ATP6AP1 LOC105373386 MIR6858 TEX28 MIR3202-2 H2AFB3 CTAG1A MIR664B EMD OPN1MW3 TMEM187 UBL4A FAM223B H2AFB1 GAB3 RPL10 TMLHE FAM3A MPP1 CLIC2 LAGE3 MECP2 F8 F8A2 MIR1184-1 F8A1 MIR3202-1 MTCP1 SNORA36A DNASE1L1 GDI1 FAM50A MIR718 LOC107987332 FUNDC2 BRCC3 SNORA56 HCFC1 H2AFB2
nsv519042	Chr.X:154082978 - 154601444 on Build GRCh38	Gain	TEX28 TKTL1 CTAG1A EMD OPN1MW3 SNORA70 UBL4A OPN1LW RPL10 FAM3A SLC10A3 LAGE3 G6PD MECP2 OPN1MW FLNA OPN1MW2 IKBKG CH17-340M24.3 TAZ FAM223A DNASE1L1 GDI1 FAM50A PLXNA3 LOC107987332 ATP6AP1 LOC105373386 MIR6858
esv33199	Chr.X:153065734 - 154591978 on Build GRCh38	Gain+Loss	SRPK3 BGN TKTL1 HCFC1-AS1 LCA10 DUSP9 SNORA70 PNMA6A OPN1LW PNCK PDZD4 SLC10A3 BCAP31 ARHGAP4 G6PD ATP2B3 HAUS7 OPN1MW FLNA ZFP92 OPN1MW2 IRAK1 IKBKG CH17-340M24.3 TAZ PLXNB3 L1CAM FAM223A ZNF275 PLXNA3 MAGEA1 IDH3G ATP6AP1 LOC105373386 FAM58A MIR6858 ABCD1 LOC105373383 TEX28 MIR3202-2 CTAG1A EMD LOC105373378 OPN1MW3 TMEM187 UBL4A RPL10 LOC105373381 LOC107983954 FAM3A LAGE3 MECP2 RENBP SLC6A8 MIR3202-1 TREX2 DNASE1L1 GDI1 FAM50A NAA10 MIR718 LOC107987332 LOC105373377 AVPR2 SSR4 HCFC1
nsv508816	Chr.X:154492171 - 154591783 on Build GRCh38	Insertion	FAM3A IKBKG CTAG1A FAM223A G6PD

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

antimicrobial response protein

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function