Hs01003751_cn

• Gene Symbol: GCNT7
• Assay Reference Genome Location: Chr.20:56518540 on build GRCh38
• Cytoband: 20q13.31

Target Gene Details

• Entrez Gene ID: 140687
• Gene Name: glucosaminyl (N-acetyl) transferase family member 7
• Gene Aliases: C20orf105, dJ1153D9.2, gcnt
• Location: Chr.20:56491492-56525925 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GCNT7	NM_080615.1			NP_542182.1
	AK131203.1			BAD18395.1

Target Gene Details

• Entrez Gene ID: 51507
• Gene Name: replication termination factor 2 domain containing 1
• Gene Aliases: C20orf43, CDAO5, HSPC164, SHUJUN-3
• Location: Chr.20:56468585-56518886 on Build GRCh38
• Assay Gene Location: Within Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RTFDC1	NM_001283035.1	10	1399	NP_001269964.1
	NM_001283036.1	9	1306	NP_001269965.1
	NM_001283037.1	8	1254	NP_001269966.1
	NM_016407.4	9	1309	NP_057491.2
	XM_017027872.1	12	1502	XP_016883361.1
	AF117231.1	9	1257	AAF17212.1
	AF161513.1	9	1266	AAF29128.1
	AF161518.1	9	1235	AAF29133.1
	AF212244.1	9	1246	AAK14929.1
	AI352436.1	2	255
	AK000481.1	9	1239	BAA91193.1
	AK000586.1	8	1202
	AK026118.1	9	1237
	AK225135.1
	AK302029.1	10	1342
	BC003359.1	9	1236	AAH03359.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv525425	Chr.20:56403979 - 56897294 on Build GRCh38	Gain	LOC105372682 GCNT7 CASS4 RTFDC1 TFAP2C FAM209A FAM209B CSTF1
nsv1056574	Chr.20:56495687 - 56761211 on Build GRCh38	Gain	LOC105372682 GCNT7 RTFDC1 TFAP2C FAM209A FAM209B

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

protein glycosylation
biological_process
mitotic DNA replication termination

Function(s)

acetylglucosaminyltransferase activity
molecular_function