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See other NAGPA CNV Assays ›
Gene Symbol
NAGPA
Assay Reference Genome
Location

Chr.16:5025382 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01023861_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51172

Gene Name:

 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase

Gene Aliases:

 APAA, UCE

Location:

 Chr.16:5024844-5033941 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NAGPA NM_016256.3 10 1671 NP_057340.2
XM_011522517.2 10 1587 XP_011520819.1
AF052111.1 5 750
AF187072.1 10 1644 AAF08273.1
AK025570.1 10 1670
AK026122.1 10 1647
AK092889.1 4 2774
AK127952.1 10 1665
BC012194.1 11 1763 AAH12194.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1042612 Chr.16:4965694 - 5150514 on Build GRCh38 Loss ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA EEF2KMT
esv3892762 Chr.16:4967386 - 5060625 on Build GRCh38 Gain C16orf89 SEC14L5 NAGPA-AS1 NAGPA
nsv428318 Chr.16:5011594 - 5374828 on Build GRCh38 Gain ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA RBFOX1 EEF2KMT
esv25186 Chr.16:4858500 - 5142800 on Build GRCh38 Gain ALG1 C16orf89 UBN1 SEC14L5 NAGPA-AS1 NAGPA EEF2KMT PPL
esv3637713 Chr.16:4957958 - 5307305 on Build GRCh38 Gain ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA RBFOX1 EEF2KMT
esv3637714 Chr.16:4958035 - 5079276 on Build GRCh38 Gain ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA
esv2422516 Chr.16:4775920 - 5160979 on Build GRCh38 Deletion ALG1 C16orf89 UBN1 GLYR1 SEPT12 ROGDI SEC14L5 NAGPA-AS1 NAGPA EEF2KMT PPL SMIM22
nsv1046986 Chr.16:4049000 - 5555721 on Build GRCh38 Gain NMRAL1 MIR6769A VASN C16orf89 CORO7-PAM16 UBALD1 ADCY9 PAM16 NAGPA SRL EEF2KMT LOC105371063 ALG1 HMOX2 MGRN1 C16orf96 CORO7 TFAP4 UBN1 GLYR1 LINC01569 ANKS3 GLIS2-AS1 ROGDI C16orf71 SEC14L5 GLIS2 NAGPA-AS1 PPL CDIP1 DNAJA3 SEPT12 ZNF500 RBFOX1 NUDT16L1 SMIM22
esv34300 Chr.16:5005938 - 5322534 on Build GRCh38 Gain ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA RBFOX1 EEF2KMT
nsv1038475 Chr.16:5004985 - 5310633 on Build GRCh38 Gain ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA RBFOX1 EEF2KMT
esv2760069 Chr.16:4922849 - 5374828 on Build GRCh38 Gain+Loss ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA RBFOX1 EEF2KMT PPL
nsv571303 Chr.16:4960912 - 5284683 on Build GRCh38 Loss ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA RBFOX1 EEF2KMT
nsv817715 Chr.16:5006294 - 5309352 on Build GRCh38 Gain ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA RBFOX1 EEF2KMT
nsv1039432 Chr.16:5013335 - 5074451 on Build GRCh38 Loss ALG1 C16orf89 SEC14L5 NAGPA-AS1 NAGPA

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