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See other TMC4 CNV Assays ›
Gene Symbol
TMC4
Assay Reference Genome
Location

Chr.19:54171940 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01039955_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 147798

Gene Name:

 transmembrane channel like 4

Gene Aliases:

 -

Location:

 Chr.19:54160095-54173250 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TMC4 NM_001145303.2 2 374 NP_001138775.2
NM_144686.3 2 356 NP_653287.2
XM_011526486.2 2 339 XP_011524788.1
AK314973.1 2 277
AY236492.1 2 373 AAP69870.1
AY263166.1 2 253 AAP78781.1
BC025323.1 2 263 AAH25323.1
BQ082417.1 2 266
DQ656026.2 2 202

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss TFPT CNOT3 NDUFA3 PRPF31 MBOAT7 TMC4 LENG1
nsv9751 Chr.19:54158885 - 54193528 on Build GRCh38 Gain TSEN34 MBOAT7 TMC4 LENG1
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion TSEN34 TFPT OSCAR CNOT3 NDUFA3 PRPF31 MBOAT7 TMC4 LENG1
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR527 ZNF818P MIR520C LOC105372457 VSTM1 ZNF765 MIR520D ZNF813 CACNG8 MIR371A LILRA5 TSEN34 ZNF331 MIR372 PRPF31 CACNG7 LILRB2 MIR519A2 RPS9 MBOAT7 MIR520B LILRB3 MIR521-2 TARM1 NLRP12 MIR517B MIR526B MIR518D ZNF525 TMC4 TPM3P9 FAM90A27P MIR515-1 MIR517A DPRX MYADM VN1R4 TFPT MIR518B MIR1283-2 MIR520F MIR519D MIR518E NDUFA3 ZNF665 MIR371B MIR518F MIR520G MIR4752 MIR512-2 LOC284379 BIRC8 OSCAR MIR526A1 MIR525 MIR518A1 VN1R2 CACNG6 MIR516B1 MIR516A2 MIR517C MIR512-1 ZNF677 MIR520E MIR522 MIR520A MIR373 MIR1323 MIR515-2 LILRB5 MIR523 MIR521-1 MIR519E MIR516B2 CNOT3 MIR498 MIR518C MIR1283-1 ZNF845 MIR935 MIR524 MIR518A2 PRKCG MIR519C MIR519B ZNF761 MIR516A1 MIR526A2 MIR520H LENG1 LILRA6 MIR519A1
nsv510774 Chr.19:54158011 - 54269511 on Build GRCh38 Deletion LILRB3 TSEN34 RPS9 LILRB5 MBOAT7 TMC4 LENG1 LILRA6
nsv428371 Chr.19:54163847 - 54366984 on Build GRCh38 Gain+Loss LAIR1 LILRB3 TSEN34 LILRB2 LILRA4 MIR4752 RPS9 LILRB5 MBOAT7 TMC4 LILRA6 LILRA5

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s)


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