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See other AATK-AS1 CNV Assays ›
Gene Symbol
AATK-AS1
Assay Reference Genome
Location

Chr.17:81178986 on build GRCh38
Cytoband
17q25.3
Assay ID Hs01057094_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 388428

Gene Name:

 AATK antisense RNA 1

Gene Aliases:

 -

Location:

 Chr.17:81165507-81183164 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AATK-AS1 NR_027255.1 3 478
AK126811.1 3 478 BAC86704.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv828128 Chr.17:80659041 - 81736487 on Build GRCh38 Loss CHMP6 MIR3065 SLC25A10 C17orf89 CEP131 MIR6786 LOC100130370 SLC38A10 BAIAP2-AS1 LOC107985022 CCDC137 ARL16 FAAP100 LOC105371921 TSPAN10 MIR338 MIR4740 FSCN2 MRPL12 BAIAP2 TEPSIN TMEM105 OXLD1 MIR657 RPTOR ACTG1 AATK HGS LINC00482 MIR1250 AATK-AS1 LOC105371925 LOC107985021 PDE6G NPLOC4 LOC400627 MIR3186 LOC100129503 LOC101928855 BAHCC1
nsv1057306 Chr.17:81154954 - 81207813 on Build GRCh38 Loss AATK CEP131 AATK-AS1
esv2758707 Chr.17:81152631 - 81345362 on Build GRCh38 Gain TMEM105 AATK LINC00482 C17orf89 CEP131 AATK-AS1 SLC38A10 TEPSIN LOC105371925
dgv46n68 Chr.17:81133921 - 81288932 on Build GRCh38 Loss AATK C17orf89 CEP131 AATK-AS1 SLC38A10 TEPSIN LOC105371925
nsv1065052 Chr.17:81080876 - 81204920 on Build GRCh38 Gain MIR657 MIR3065 AATK MIR1250 CEP131 AATK-AS1 MIR338 BAIAP2
nsv470619 Chr.17:81032233 - 81349843 on Build GRCh38 Loss TMEM105 MIR657 MIR3065 AATK LINC00482 MIR1250 C17orf89 CEP131 AATK-AS1 SLC38A10 LOC105371925 BAIAP2-AS1 MIR338 BAIAP2 TEPSIN
dgv3292n100 Chr.17:81019582 - 81204920 on Build GRCh38 Gain MIR657 MIR3065 AATK MIR1250 CEP131 AATK-AS1 MIR338 BAIAP2 BAIAP2-AS1
nsv952389 Chr.17:81137501 - 81593774 on Build GRCh38 Deletion TMEM105 ACTG1 AATK LINC00482 C17orf89 CEP131 AATK-AS1 LOC100130370 SLC38A10 LOC105371925 NPLOC4 FAAP100 MIR3186 MIR4740 FSCN2 TEPSIN BAHCC1
nsv1064123 Chr.17:81168449 - 81282457 on Build GRCh38 Gain C17orf89 CEP131 AATK-AS1 SLC38A10 TEPSIN LOC105371925
nsv1066947 Chr.17:81094837 - 81181290 on Build GRCh38 Loss MIR657 MIR3065 AATK MIR1250 AATK-AS1 MIR338 BAIAP2

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More Information


Additional Information:

For this assay, SNP(s) [rs112222853] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

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