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See other STK19 CNV Assays ›
Gene Symbol
STK19
Assay Reference Genome
Location

Chr.6:31980515 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01060330_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8859

Gene Name:

 serine/threonine kinase 19

Gene Aliases:

 D6S60, D6S60E, G11, HLA-RP1, RP1

Location:

 Chr.6:31971175-31981446 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 6 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
STK19 NM_004197.1 NP_004188.1
NM_032454.1 NP_115830.1
NR_026717.1
AK307198.1
BC110347.1 AAI10348.1
BC121128.1
BC121129.1
BC143833.1
L26260.1 AAA20122.1
X77386.1 CAA54565.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv10466n54 Chr.6:31980320 - 32029165 on Build GRCh38 Loss C4A TNXA STK19 C4B CYP21A1P
esv28110 Chr.6:31980130 - 32048749 on Build GRCh38 Gain+Loss C4A TNXB CYP21A2 TNXA STK19 C4B CYP21A1P
nsv601971 Chr.6:31971488 - 32046679 on Build GRCh38 Gain C4A TNXB CYP21A2 TNXA DXO STK19 C4B CYP21A1P
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss RNF5 MIR6721 NOTCH4 EHMT2 TNXA STK19 HSPA1A HLA-DRB6 C6orf10 SLC44A4 AGPAT1 GPSM3 HLA-DQB1 NEU1 LOC101929163 HLA-DQB1-AS1 BTNL2 ATF6B PRRT1 HCG23 DXO MIR6833 ZBTB12 C6orf48 C2 HLA-DQA1 SKIV2L SNORD48 SNORD52 HLA-DRB5 EGFL8 FKBPL MIR1236 HSPA1B PPT2 HLA-DRA NELFE PBX2 CYP21A2 PPT2-EGFL8 C4A LOC100507547 TNXB C4B C2-AS1 AGER CFB HLA-DRB1 CYP21A1P
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss RNF5 MIR6721 EGFL8 FKBPL MIR1236 NOTCH4 PPT2 TNXA NELFE STK19 PBX2 AGPAT1 GPSM3 CYP21A2 PPT2-EGFL8 C4A ATF6B LOC100507547 PRRT1 TNXB DXO C4B C2-AS1 AGER CFB MIR6833 C2 SKIV2L CYP21A1P
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion MCCD1 C6orf25 RNF5 MIR6721 ATP6V1G2-DDX39B NOTCH4 EHMT2 HCG26 TNXA HSPA1L DDX39B STK19 SNORA38 HSPA1A ATP6V1G2 HLA-DRB6 C6orf10 SLC44A4 LY6G6E AGPAT1 SAPCD1-AS1 APOM LTA GPSM3 TNF NEU1 LOC101929163 AIF1 MIR6832 BTNL2 ATF6B SNORD84 PRRT1 BAG6 HCG23 DXO MIR6833 ZBTB12 C6orf48 C2 NFKBIL1 SKIV2L SNORD48 C6orf47 SNORD52 HLA-DRB5 EGFL8 FKBPL GPANK1 MSH5 MIR1236 DDX39B-AS1 LY6G5C LY6G6F HSPA1B PPT2 HLA-DRA PRRC2A CLIC1 NELFE PBX2 VWA7 HCP5 DDAH2 VARS LST1 CYP21A2 LOC100287329 LY6G6D PPT2-EGFL8 SAPCD1 CSNK2B MIR4646 C4A LOC100507547 TNXB LY6G6C MICB C4B C2-AS1 SNORD117 AGER LTB CFB LOC102725068 MSH5-SAPCD1 LSM2 ABHD16A NCR3 HLA-DRB1 LY6G5B CYP21A1P
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion MCCD1 C6orf25 RNF5 MIR6721 MIR6834 ATP6V1G2-DDX39B STK19 LY6G6E SAPCD1-AS1 APOM LTA GPSM3 TNF KIFC1 MIR219A1 NEU1 HLA-DQA2 HLA-DMA MIR6873 SLC39A7 AIF1 RING1 SNORD84 PRRT1 B3GALT4 HCG23 DXO CUTA VPS52 PSMB8 MIR6833 C6orf48 C2 HLA-DQA1 PPP1R2P1 TAP2 NFKBIL1 C6orf47 HLA-DRB5 EGFL8 GPANK1 MSH5 DDX39B-AS1 LY6G6F HSPA1B HLA-DRA CLIC1 ZBTB9 RGL2 HCP5 DDAH2 BRD2 WDR46 VARS CYP21A2 PPT2-EGFL8 CSNK2B MIR4646 HLA-DQB2 RPS18 LY6G6C DAXX AGER CFB LOC102725068 MSH5-SAPCD1 LOC100294145 HLA-DOB LSM2 NCR3 CYP21A1P PFDN6 PSMB8-AS1 NOTCH4 HLA-DOA EHMT2 HCG26 TNXA HLA-DPB2 HSPA1L DDX39B SNORA38 HSPA1A ATP6V1G2 HLA-DRB6 C6orf10 SLC44A4 ZBTB22 HCG24 AGPAT1 HLA-DPB1 HLA-DQB1 LOC101929163 PHF1 HLA-DQB1-AS1 MIR6832 BTNL2 TAP1 ATF6B MIR3135B BAG6 PSMB9 HCG25 ZBTB12 HSD17B8 SKIV2L SNORD48 SNORD52 FKBPL HLA-DPA1 MIR1236 LY6G5C COL11A2 PPT2 PRRC2A RXRB NELFE PBX2 VWA7 SYNGAP1 LST1 LOC100287329 LY6G6D SAPCD1 C4A LOC100507547 HLA-DMB TNXB MICB C4B C2-AS1 MIR5004 SNORD117 LTB ABHD16A TAPBP HLA-DRB1 LY6G5B
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss MCCD1 C6orf25 ATP6V1G2-DDX39B EHMT2 HCG26 TNXA HSPA1L DDX39B STK19 SNORA38 HSPA1A ATP6V1G2 SLC44A4 LY6G6E MIR6891 SAPCD1-AS1 APOM LTA HLA-B TNF NEU1 AIF1 MIR6832 SNORD84 BAG6 DXO MICA ZBTB12 C6orf48 C2 NFKBIL1 SKIV2L SNORD48 C6orf47 SNORD52 GPANK1 MSH5 MIR1236 DDX39B-AS1 LY6G5C LY6G6F HSPA1B PRRC2A CLIC1 NELFE VWA7 HCP5 DDAH2 VARS LST1 CYP21A2 LOC100287329 LY6G6D SAPCD1 CSNK2B MIR4646 C4A TNXB LY6G6C MICB C4B C2-AS1 SNORD117 LTB CFB LOC102725068 MSH5-SAPCD1 LSM2 ABHD16A NCR3 LY6G5B CYP21A1P
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion MCCD1 C6orf25 RNF5 MIR6721 MIR6834 ATP6V1G2-DDX39B STK19 LY6G6E SAPCD1-AS1 APOM LTA GPSM3 TNF KIFC1 MIR219A1 NEU1 HLA-DQA2 HLA-DMA MIR6873 SLC39A7 AIF1 RING1 SNORD84 PRRT1 B3GALT4 HCG23 DXO CUTA VPS52 PSMB8 MIR6833 C6orf48 C2 HLA-DQA1 PPP1R2P1 TAP2 NFKBIL1 C6orf47 HLA-DRB5 EGFL8 GPANK1 MSH5 DDX39B-AS1 LY6G6F HSPA1B HLA-DRA CLIC1 ZBTB9 RGL2 HCP5 DDAH2 BRD2 WDR46 VARS CYP21A2 PPT2-EGFL8 CSNK2B MIR4646 HLA-DQB2 RPS18 LY6G6C DAXX AGER CFB LOC102725068 MSH5-SAPCD1 LOC100294145 HLA-DOB LSM2 NCR3 CYP21A1P PFDN6 PSMB8-AS1 NOTCH4 HLA-DOA EHMT2 HCG26 TNXA HLA-DPB2 HSPA1L DDX39B SNORA38 HSPA1A ATP6V1G2 HLA-DRB6 C6orf10 SLC44A4 ZBTB22 HCG24 AGPAT1 HLA-DPB1 HLA-DQB1 LOC101929163 PHF1 HLA-DQB1-AS1 MIR6832 BTNL2 TAP1 ATF6B MIR3135B BAG6 PSMB9 HCG25 ZBTB12 HSD17B8 SKIV2L SNORD48 SNORD52 FKBPL HLA-DPA1 MIR1236 LY6G5C COL11A2 PPT2 PRRC2A RXRB NELFE PBX2 VWA7 SYNGAP1 LST1 LOC100287329 LY6G6D SAPCD1 C4A LOC100507547 HLA-DMB TNXB MICB C4B C2-AS1 MIR5004 SNORD117 LTB ABHD16A TAPBP HLA-DRB1 LY6G5B
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss MCCD1 C6orf25 RNF5 MIR6721 ATP6V1G2-DDX39B NOTCH4 EHMT2 HCG26 TNXA HSPA1L DDX39B STK19 SNORA38 HSPA1A ATP6V1G2 C6orf10 SLC44A4 LY6G6E MIR6891 AGPAT1 SAPCD1-AS1 APOM LTA HLA-B GPSM3 TNF NEU1 LOC101929163 AIF1 MIR6832 BTNL2 ATF6B SNORD84 PRRT1 BAG6 HCG23 DXO MICA MIR6833 ZBTB12 C6orf48 C2 NFKBIL1 SKIV2L SNORD48 C6orf47 SNORD52 EGFL8 FKBPL GPANK1 MSH5 MIR1236 DDX39B-AS1 LY6G5C LY6G6F HSPA1B PPT2 HLA-DRA PRRC2A CLIC1 NELFE PBX2 VWA7 HCP5 DDAH2 VARS LST1 CYP21A2 LOC100287329 LY6G6D PPT2-EGFL8 SAPCD1 CSNK2B MIR4646 C4A LOC100507547 TNXB LY6G6C MICB C4B C2-AS1 SNORD117 AGER LTB CFB LOC102725068 MSH5-SAPCD1 LSM2 ABHD16A NCR3 LY6G5B CYP21A1P
nsv10824 Chr.6:31980357 - 32046247 on Build GRCh38 Gain+Loss C4A TNXB CYP21A2 TNXA STK19 C4B CYP21A1P
nsv5247 Chr.6:31957962 - 32055439 on Build GRCh38 Deletion C4A TNXB CYP21A2 TNXA DXO NELFE STK19 C4B SKIV2L CYP21A1P

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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