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See other RTEL1 CNV Assays ›
Gene Symbol
RTEL1
Assay Reference Genome
Location

Chr.20:63667492 on build GRCh38
Cytoband
20q13.33
Assay ID Hs01065127_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51750

Gene Name:

 regulator of telomere elongation helicase 1

Gene Aliases:

 C20orf41, DKCA4, DKCB5, NHL, PFBMFT3, RTEL

Location:

 Chr.20:63657810-63696253 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1 NM_001283009.1 NP_001269938.1
NM_001283010.1 NP_001269939.1
NM_016434.3 NP_057518.1
NM_032957.4 NP_116575.3
AF217795.1 AAF33687.1
AK299332.1
AK302508.1
AK304798.1
JX119186.1

Target Gene Details

Entrez Gene ID:

 100533107

Gene Name:

 RTEL1-TNFRSF6B readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.20:63657810-63698698 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1-TNFRSF6B NR_037882.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion ZBTB46 ARFRP1 SLC2A4RG STMN3 RTEL1-TNFRSF6B ZBTB46-AS1 LIME1 TNFRSF6B ZGPAT RTEL1
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion ZBTB46 ARFRP1 SLC2A4RG STMN3 RTEL1-TNFRSF6B LIME1 TNFRSF6B ZGPAT RTEL1
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss LINC00176 MIR941-1 UCKL1 MIR647 STMN3 RTEL1-TNFRSF6B MIR941-3 ZBTB46-AS1 PCMTD2 SOX18 ZGPAT TCEA2 MIR6813 MIR1914 DNAJC5 LINC00266-1 ARFRP1 TPD52L2 ABHD16B ZNF512B LIME1 TNFRSF6B NPBWR2 SAMD10 PRPF6 MIR941-5 SLC2A4RG OPRL1 LOC100505771 RTEL1 ZBTB46 MIR941-4 C20orf181 LKAAEAR1 MYT1 UCKL1-AS1 RGS19 GMEB2 MIR941-2
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss PPDPF EEF1A2 SLC2A4RG STMN3 RTEL1-TNFRSF6B ZGPAT LOC100505771 SRMS RTEL1 PTK6 ZBTB46 ARFRP1 FNDC11 LIME1 GMEB2 TNFRSF6B HELZ2
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss PPDPF EEF1A2 SLC2A4RG STMN3 RTEL1-TNFRSF6B ZGPAT LOC100505771 SRMS RTEL1 PTK6 ZBTB46 ARFRP1 FNDC11 KCNQ2 LIME1 GMEB2 TNFRSF6B HELZ2

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