Genomic Map
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Target Gene Details
Entrez Gene ID: | 1912 |
Gene Name: | polyhomeotic homolog 2 |
Gene Aliases: |
EDR2, HPH2, PH2 |
Location: |
Chr.1:33323623-33431017 on Build GRCh38 |
Assay Gene Location: | Within Exon 24 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PHC2 | NM_004427.3 | 7 | 2339 | NP_004418.2 |
| NM_198040.2 | 14 | 3646 | NP_932157.1 | |
| XM_005270570.1 | 7 | 2275 | XP_005270627.1 | |
| XM_017000513.1 | 15 | 4145 | XP_016856002.1 | |
| XM_017000514.1 | 15 | 3757 | XP_016856003.1 | |
| XM_017000515.1 | 15 | 3850 | XP_016856004.1 | |
| XM_017000516.1 | 15 | 4079 | XP_016856005.1 | |
| XM_017000517.1 | 15 | 3691 | XP_016856006.1 | |
| XM_017000518.1 | 15 | 3784 | XP_016856007.1 | |
| XM_017000519.1 | 16 | 4234 | XP_016856008.1 | |
| XM_017000520.1 | 14 | 3604 | XP_016856009.1 | |
| XM_017000521.1 | 14 | 4023 | XP_016856010.1 | |
| AJ419231.1 | 14 | 3646 | CAD11673.1 | |
| AK056429.1 | 8 | 2576 | ||
| AK091856.1 | 1 | 2076 | ||
| AK128821.1 | 8 | 2324 | BAC87622.1 | |
| BC015450.1 | 3 | 1486 | AAH15450.1 | |
| BC028396.1 | 7 | 2310 | ||
| BC029269.1 | 7 | 2181 | AAH29269.1 | |
| BC068573.1 | 7 | 2233 | AAH68573.1 | |
| BC092492.1 | 7 | 2233 | AAH92492.1 | |
| BC110863.1 | 7 | 2232 | ||
| BX537498.1 | 1 | 2311 | ||
| CA949539.1 | 1 | 228 | ||
| U89278.1 | 7 | 2325 | AAC51170.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv516693 | Chr.1:33319026 - 33354533 on Build GRCh38 | Loss |
 PHC2
MIR3605
LOC101929464
A3GALT2
|
| nsv522364 | Chr.1:33266591 - 33367332 on Build GRCh38 | Loss |
PHC2
MIR3605
LOC101929464
A3GALT2
ZNF362
|
| nsv545963 | Chr.1:33254041 - 33354533 on Build GRCh38 | Loss |
PHC2
MIR3605
LOC101929464
A3GALT2
ZNF362
|
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Additional Information:
For this assay, SNP(s) [rs113937952] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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