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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31660096 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01124493_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 677 NP_067007.3
AJ245433.1 1 638 CAB51603.1
AK315349.1 1 366
BC012950.1 1 677 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion TNXB DXO ABHD16A TNXA C4A SLC44A4 EHMT2 PBX2 HSPA1L GPSM3 LOC102725068 SKIV2L HCP5 HSPA1B PRRC2A HLA-DRA VWA7 MIR6833 DDX39B SNORA38 ATP6V1G2 GPANK1 AGER LY6G6D LY6G5C CFB ATP6V1G2-DDX39B STK19 VARS MICB HLA-DRB1 MIR1236 LSM2 PRRT1 MSH5-SAPCD1 C4B SAPCD1 LOC101929163 APOM MCCD1 SNORD117 SNORD84 HSPA1A LTA NOTCH4 MIR6721 BAG6 PPT2-EGFL8 C6orf25 DDX39B-AS1 CYP21A1P HCG26 MIR4646 C2-AS1 LY6G6F ATF6B EGFL8 HCG23 FKBPL AGPAT1 LY6G6C C6orf10 ZBTB12 SAPCD1-AS1 AIF1 C6orf48 CYP21A2 TNF RNF5 LTB LY6G5B LY6G6E BTNL2 HLA-DRB5 CSNK2B NFKBIL1 C2 LST1 MIR6832 NEU1 NELFE MSH5 C6orf47 LOC100287329 LOC100507547 SNORD52 NCR3 CLIC1 PPT2 SNORD48 DDAH2 HLA-DRB6
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss C6orf47 BAG6 APOM AIF1 PRRC2A MIR6832 SNORA38 GPANK1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss TNXB DXO ABHD16A TNXA C4A SLC44A4 EHMT2 HSPA1L LOC102725068 SKIV2L HCP5 HSPA1B PRRC2A VWA7 DDX39B SNORA38 ATP6V1G2 GPANK1 LY6G6D LY6G5C MICA CFB ATP6V1G2-DDX39B STK19 VARS MICB MIR1236 LSM2 MSH5-SAPCD1 C4B SAPCD1 APOM MCCD1 SNORD117 SNORD84 HSPA1A LTA HLA-B BAG6 C6orf25 DDX39B-AS1 CYP21A1P HCG26 MIR4646 C2-AS1 LY6G6F LY6G6C ZBTB12 SAPCD1-AS1 AIF1 C6orf48 CYP21A2 TNF LTB LY6G5B LY6G6E CSNK2B NFKBIL1 C2 LST1 MIR6832 NEU1 NELFE MSH5 C6orf47 LOC100287329 SNORD52 NCR3 CLIC1 SNORD48 DDAH2 MIR6891
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion DXO HSD17B8 SLC39A7 C4A SLC44A4 EHMT2 HSPA1L KIFC1 TAP1 GPSM3 LOC102725068 VPS52 MIR5004 HSPA1B MIR6833 DDX39B ATP6V1G2 PSMB9 LY6G5C CFB HLA-DPB1 VARS HLA-DRB1 HCG24 LSM2 PRRT1 LOC101929163 HLA-DOA ZBTB9 SNORD84 HSPA1A SYNGAP1 PPT2-EGFL8 MIR6834 HCG26 MIR4646 C2-AS1 LY6G6F EGFL8 HCG23 FKBPL AGPAT1 LY6G6C WDR46 ZBTB12 B3GALT4 LTB LY6G6E LOC100294145 CSNK2B NFKBIL1 C2 COL11A2 HLA-DPB2 MSH5 TAP2 SNORD52 NCR3 PPT2 RXRB TAPBP TNXB RGL2 RPS18 HLA-DMA ABHD16A TNXA RING1 PBX2 HLA-DQA1 DAXX SKIV2L HCP5 PRRC2A HLA-DRA VWA7 SNORA38 GPANK1 AGER HLA-DQA2 LY6G6D ATP6V1G2-DDX39B STK19 HLA-DQB2 MICB MIR1236 PHF1 HLA-DOB BRD2 PFDN6 MSH5-SAPCD1 MIR6873 C4B SAPCD1 APOM MCCD1 SNORD117 LTA NOTCH4 MIR6721 BAG6 C6orf25 DDX39B-AS1 CYP21A1P HCG25 ATF6B MIR219A1 ZBTB22 C6orf10 PPP1R2P1 SAPCD1-AS1 AIF1 C6orf48 CYP21A2 HLA-DPA1 PSMB8 TNF RNF5 PSMB8-AS1 HLA-DQB1 LY6G5B BTNL2 HLA-DRB5 LST1 MIR6832 MIR3135B NEU1 NELFE CUTA C6orf47 LOC100287329 LOC100507547 HLA-DMB HLA-DQB1-AS1 CLIC1 SNORD48 DDAH2 HLA-DRB6
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion DXO HSD17B8 SLC39A7 C4A SLC44A4 EHMT2 HSPA1L KIFC1 TAP1 GPSM3 LOC102725068 VPS52 MIR5004 HSPA1B MIR6833 DDX39B ATP6V1G2 PSMB9 LY6G5C CFB HLA-DPB1 VARS HLA-DRB1 HCG24 LSM2 PRRT1 LOC101929163 HLA-DOA ZBTB9 SNORD84 HSPA1A SYNGAP1 PPT2-EGFL8 MIR6834 HCG26 MIR4646 C2-AS1 LY6G6F EGFL8 HCG23 FKBPL AGPAT1 LY6G6C WDR46 ZBTB12 B3GALT4 LTB LY6G6E LOC100294145 CSNK2B NFKBIL1 C2 COL11A2 HLA-DPB2 MSH5 TAP2 SNORD52 NCR3 PPT2 RXRB TAPBP TNXB RGL2 RPS18 HLA-DMA ABHD16A TNXA RING1 PBX2 HLA-DQA1 DAXX SKIV2L HCP5 PRRC2A HLA-DRA VWA7 SNORA38 GPANK1 AGER HLA-DQA2 LY6G6D ATP6V1G2-DDX39B STK19 HLA-DQB2 MICB MIR1236 PHF1 HLA-DOB BRD2 PFDN6 MSH5-SAPCD1 MIR6873 C4B SAPCD1 APOM MCCD1 SNORD117 LTA NOTCH4 MIR6721 BAG6 C6orf25 DDX39B-AS1 CYP21A1P HCG25 ATF6B MIR219A1 ZBTB22 C6orf10 PPP1R2P1 SAPCD1-AS1 AIF1 C6orf48 CYP21A2 HLA-DPA1 PSMB8 TNF RNF5 PSMB8-AS1 HLA-DQB1 LY6G5B BTNL2 HLA-DRB5 LST1 MIR6832 MIR3135B NEU1 NELFE CUTA C6orf47 LOC100287329 LOC100507547 HLA-DMB HLA-DQB1-AS1 CLIC1 SNORD48 DDAH2 HLA-DRB6
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss TNXB DXO ABHD16A TNXA C4A SLC44A4 EHMT2 PBX2 HSPA1L GPSM3 LOC102725068 SKIV2L HCP5 HSPA1B PRRC2A HLA-DRA VWA7 MIR6833 DDX39B SNORA38 ATP6V1G2 GPANK1 AGER LY6G6D LY6G5C MICA CFB ATP6V1G2-DDX39B STK19 VARS MICB MIR1236 LSM2 PRRT1 MSH5-SAPCD1 C4B SAPCD1 LOC101929163 APOM MCCD1 SNORD117 SNORD84 HSPA1A LTA NOTCH4 MIR6721 HLA-B BAG6 PPT2-EGFL8 C6orf25 DDX39B-AS1 CYP21A1P HCG26 MIR4646 C2-AS1 LY6G6F ATF6B EGFL8 HCG23 FKBPL AGPAT1 LY6G6C C6orf10 ZBTB12 SAPCD1-AS1 AIF1 C6orf48 CYP21A2 TNF RNF5 LTB LY6G5B LY6G6E BTNL2 CSNK2B NFKBIL1 C2 LST1 MIR6832 NEU1 NELFE MSH5 C6orf47 LOC100287329 LOC100507547 SNORD52 NCR3 CLIC1 PPT2 SNORD48 DDAH2 MIR6891
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion LY6G5C LY6G5B LY6G6E ABHD16A BAG6 CSNK2B MIR4646 MIR6832 LY6G6F C6orf47 APOM AIF1 PRRC2A SNORA38 GPANK1
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss LTA ABHD16A BAG6 DDX39B-AS1 AIF1 PRRC2A DDX39B SNORA38 TNF ATP6V1G2 GPANK1 LTB LY6G5C ATP6V1G2-DDX39B LY6G5B CSNK2B NFKBIL1 LST1 MIR6832 C6orf47 LOC100287329 APOM NCR3 MCCD1 SNORD117 SNORD84

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