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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31660771 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01136530_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 1 130 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 NP_067007.3
BC012950.1 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion SNORD52 MIR6832 LY6G5C HSPA1L SAPCD1 MCCD1 DDAH2 ABHD16A GPANK1 SNORD84 STK19 PBX2 CYP21A1P RNF5 TNXA SAPCD1-AS1 HLA-DRA NEU1 ATP6V1G2 HSPA1A SLC44A4 ATP6V1G2-DDX39B CYP21A2 LOC102725068 C2 HSPA1B MSH5-SAPCD1 DDX39B-AS1 ATF6B SKIV2L VARS BAG6 LY6G6D HCP5 SNORD117 LOC101929163 PPT2-EGFL8 NCR3 C6orf47 LY6G6C EGFL8 C2-AS1 DDX39B SNORD48 LOC100287329 LTB C6orf10 MIR6721 C4B TNXB LST1 LSM2 MIR4646 C6orf25 DXO CSNK2B FKBPL BTNL2 MIR1236 VWA7 AIF1 PRRT1 GPSM3 NOTCH4 LY6G6F HCG23 HLA-DRB6 AGPAT1 LY6G5B HLA-DRB1 PPT2 LTA NELFE EHMT2 LY6G6E ZBTB12 AGER CLIC1 HLA-DRB5 MSH5 SNORA38 HCG26 MIR6833 LOC100507547 PRRC2A NFKBIL1 TNF CFB C4A MICB C6orf48 APOM
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss PRRC2A MIR6832 AIF1 BAG6 GPANK1 C6orf47 SNORA38 APOM
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss SNORD52 MIR6832 LY6G5C HSPA1L SAPCD1 MCCD1 DDAH2 ABHD16A GPANK1 SNORD84 STK19 MIR6891 CYP21A1P TNXA SAPCD1-AS1 NEU1 ATP6V1G2 HSPA1A SLC44A4 MICA ATP6V1G2-DDX39B CYP21A2 LOC102725068 C2 HSPA1B MSH5-SAPCD1 DDX39B-AS1 SKIV2L VARS BAG6 LY6G6D HCP5 SNORD117 NCR3 C6orf47 LY6G6C C2-AS1 DDX39B SNORD48 LOC100287329 LTB C4B TNXB LST1 LSM2 HLA-B MIR4646 C6orf25 DXO CSNK2B MIR1236 VWA7 AIF1 LY6G6F LY6G5B LTA NELFE EHMT2 LY6G6E ZBTB12 CLIC1 MSH5 SNORA38 HCG26 PRRC2A NFKBIL1 TNF CFB C4A MICB C6orf48 APOM
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion SNORD52 MIR6832 HLA-DMB HSPA1L SAPCD1 DDAH2 ABHD16A GPANK1 SNORD84 HLA-DQA2 STK19 HLA-DQB1 PBX2 CYP21A1P RNF5 TNXA HLA-DRA NEU1 SLC44A4 CYP21A2 LOC102725068 C2 SKIV2L VARS LY6G6D SNORD117 HLA-DOA TAP1 COL11A2 PSMB9 NCR3 C6orf47 MIR3135B MIR6873 DDX39B LOC100287329 CUTA C6orf10 LST1 MIR4646 HLA-DQB2 RPS18 C6orf25 DXO BTNL2 AIF1 PRRT1 GPSM3 HCG25 PPP1R2P1 HLA-DPB1 HLA-DRB6 TAPBP SLC39A7 LOC100294145 LTA NELFE EHMT2 PHF1 HLA-DPA1 CLIC1 BRD2 ZBTB22 SNORA38 MIR6834 HCG26 LOC100507547 TNF C4A MICB HSD17B8 C6orf48 APOM MIR5004 LY6G5C PSMB8 ZBTB9 MCCD1 HLA-DQB1-AS1 SAPCD1-AS1 TAP2 ATP6V1G2 HSPA1A ATP6V1G2-DDX39B KIFC1 RGL2 HSPA1B MSH5-SAPCD1 DDX39B-AS1 ATF6B BAG6 HCP5 LOC101929163 PPT2-EGFL8 LY6G6C EGFL8 B3GALT4 C2-AS1 SNORD48 PSMB8-AS1 LTB HLA-DOB MIR6721 C4B TNXB LSM2 HCG24 MIR219A1 HLA-DPB2 VPS52 CSNK2B WDR46 FKBPL PFDN6 MIR1236 VWA7 RXRB NOTCH4 LY6G6F HCG23 AGPAT1 LY6G5B HLA-DRB1 PPT2 DAXX HLA-DQA1 LY6G6E ZBTB12 AGER HLA-DRB5 MSH5 SYNGAP1 HLA-DMA RING1 MIR6833 PRRC2A NFKBIL1 CFB
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion SNORD52 MIR6832 HLA-DMB HSPA1L SAPCD1 DDAH2 ABHD16A GPANK1 SNORD84 HLA-DQA2 STK19 HLA-DQB1 PBX2 CYP21A1P RNF5 TNXA HLA-DRA NEU1 SLC44A4 CYP21A2 LOC102725068 C2 SKIV2L VARS LY6G6D SNORD117 HLA-DOA TAP1 COL11A2 PSMB9 NCR3 C6orf47 MIR3135B MIR6873 DDX39B LOC100287329 CUTA C6orf10 LST1 MIR4646 HLA-DQB2 RPS18 C6orf25 DXO BTNL2 AIF1 PRRT1 GPSM3 HCG25 PPP1R2P1 HLA-DPB1 HLA-DRB6 TAPBP SLC39A7 LOC100294145 LTA NELFE EHMT2 PHF1 HLA-DPA1 CLIC1 BRD2 ZBTB22 SNORA38 MIR6834 HCG26 LOC100507547 TNF C4A MICB HSD17B8 C6orf48 APOM MIR5004 LY6G5C PSMB8 ZBTB9 MCCD1 HLA-DQB1-AS1 SAPCD1-AS1 TAP2 ATP6V1G2 HSPA1A ATP6V1G2-DDX39B KIFC1 RGL2 HSPA1B MSH5-SAPCD1 DDX39B-AS1 ATF6B BAG6 HCP5 LOC101929163 PPT2-EGFL8 LY6G6C EGFL8 B3GALT4 C2-AS1 SNORD48 PSMB8-AS1 LTB HLA-DOB MIR6721 C4B TNXB LSM2 HCG24 MIR219A1 HLA-DPB2 VPS52 CSNK2B WDR46 FKBPL PFDN6 MIR1236 VWA7 RXRB NOTCH4 LY6G6F HCG23 AGPAT1 LY6G5B HLA-DRB1 PPT2 DAXX HLA-DQA1 LY6G6E ZBTB12 AGER HLA-DRB5 MSH5 SYNGAP1 HLA-DMA RING1 MIR6833 PRRC2A NFKBIL1 CFB
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss SNORD52 MIR6832 LY6G5C HSPA1L SAPCD1 MCCD1 DDAH2 ABHD16A GPANK1 SNORD84 STK19 MIR6891 PBX2 CYP21A1P RNF5 TNXA SAPCD1-AS1 HLA-DRA NEU1 ATP6V1G2 HSPA1A SLC44A4 MICA ATP6V1G2-DDX39B CYP21A2 LOC102725068 C2 HSPA1B MSH5-SAPCD1 DDX39B-AS1 ATF6B SKIV2L VARS BAG6 LY6G6D HCP5 SNORD117 LOC101929163 PPT2-EGFL8 NCR3 C6orf47 LY6G6C EGFL8 C2-AS1 DDX39B SNORD48 LOC100287329 LTB C6orf10 MIR6721 C4B TNXB LST1 LSM2 HLA-B MIR4646 C6orf25 DXO CSNK2B FKBPL BTNL2 MIR1236 VWA7 AIF1 PRRT1 GPSM3 NOTCH4 LY6G6F HCG23 AGPAT1 LY6G5B PPT2 LTA NELFE EHMT2 LY6G6E ZBTB12 AGER CLIC1 MSH5 SNORA38 HCG26 MIR6833 LOC100507547 PRRC2A NFKBIL1 TNF CFB C4A MICB C6orf48 APOM
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion MIR6832 LY6G5C BAG6 MIR4646 LY6G6E ABHD16A CSNK2B GPANK1 C6orf47 SNORA38 PRRC2A AIF1 LY6G6F LY6G5B APOM
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss LST1 MIR6832 LY6G5C MCCD1 ABHD16A CSNK2B GPANK1 SNORD84 AIF1 ATP6V1G2 ATP6V1G2-DDX39B LY6G5B DDX39B-AS1 LTA BAG6 SNORD117 NCR3 C6orf47 SNORA38 PRRC2A NFKBIL1 DDX39B TNF LOC100287329 LTB APOM

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