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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154512840 on build GRCh38
Cytoband
Xq28
Assay ID Hs01155136_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_011531185.2 XP_011529487.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
XM_017029702.1 XP_016885191.1
AK024601.1
AK057945.1
AK294116.1
AK314682.1
AL539139.3
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss TMLHE LOC101927830 FAM223A HCFC1 CTAG2 PLXNA3 GDI1 CTAG1A MPP1 GAB3 FAM50A MIR1184-2 MIR3202-1 H2AFB3 TEX28 LOC107987332 LOC105373386 TKTL1 H2AFB2 FLNA H2AFB1 SPRY3 VBP1 MIR3202-2 TAZ G6PD OPN1MW SMIM9 F8A1 FAM3A MIR1184-1 FAM223B CH17-340M24.3 RAB39B SLC10A3 F8A3 RPL10 MTCP1 CLIC2 UBL4A OPN1LW TMLHE-AS1 EMD MIR664B SNORA36A ATP6AP1 LAGE3 DKC1 BRCC3 MECP2 HCFC1-AS1 OPN1MW3 F8A2 CTAG1B MIR1184-3 F8 MIR6858 OPN1MW2 DNASE1L1 MIR718 TMEM187 FUNDC2 SNORA70 IKBKG SNORA56 CMC4 IRAK1
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain FAM223A CH17-340M24.3 SLC10A3 PLXNA3 RPL10 GDI1 CTAG1A FAM50A UBL4A OPN1LW EMD ATP6AP1 LAGE3 TEX28 LOC107987332 LOC105373386 MECP2 OPN1MW3 TKTL1 MIR6858 FLNA OPN1MW2 DNASE1L1 SNORA70 TAZ IKBKG G6PD OPN1MW FAM3A
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss PLXNB3 FAM223A PNMA6A HCFC1 PLXNA3 GDI1 CTAG1A ABCD1 MAGEA1 FAM50A MIR3202-1 ARHGAP4 PNCK AVPR2 TEX28 LOC107987332 LOC105373386 LOC105373377 TKTL1 FLNA MIR3202-2 TAZ BCAP31 L1CAM G6PD OPN1MW LOC105373381 LOC105373383 FAM3A SRPK3 IDH3G ATP2B3 CH17-340M24.3 SLC10A3 LCA10 FAM58A RPL10 TREX2 LOC107983954 ZNF275 UBL4A OPN1LW DUSP9 BGN EMD HAUS7 ATP6AP1 LAGE3 PDZD4 MECP2 HCFC1-AS1 ZFP92 OPN1MW3 SLC6A8 LOC105373378 MIR6858 OPN1MW2 NAA10 DNASE1L1 MIR718 SSR4 TMEM187 SNORA70 IKBKG RENBP IRAK1
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion FAM223A IKBKG G6PD FAM3A CTAG1A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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