Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 9138 |
Gene Name: | Rho guanine nucleotide exchange factor 1 |
Gene Aliases: |
GEF1, LBCL2, LSC, P115-RHOGEF, SUB1.5 |
Location: |
Chr.19:41883200-41907454 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 12 - Exon 13 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ARHGEF1 | NM_004706.3 | NP_004697.2 | ||
| NM_198977.1 | NP_945328.1 | |||
| NM_199002.1 | NP_945353.1 | |||
| XM_005259386.4 | XP_005259443.1 | |||
| XM_005259390.4 | XP_005259447.1 | |||
| XM_011527468.2 | XP_011525770.1 | |||
| AL832294.1 | ||||
| BC005155.2 | AAH05155.2 | |||
| BC011726.2 | AAH11726.1 | |||
| BC034013.1 | AAH34013.2 | |||
| BC067262.1 | AAH67262.1 | |||
| BT007421.1 | AAP36089.1 | |||
| U64105.1 | AAB17896.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv520239 | Chr.19:41853387 - 42426852 on Build GRCh38 | Loss |
 CIC
ARHGEF1
LIPE-AS1
ZNF526
ZNF574
GSK3A
CD79A
LOC390937
RPS19
MIR4323
PRR19
ATP1A3
DEDD2
LOC100505585
MIR8077
CNFN
MIR6797
RABAC1
LOC100505622
MEGF8
POU2F2
PAFAH1B3
LOC101930071
LIPE
TMEM145
GRIK5
ERF
|
| nsv953580 | Chr.19:41888230 - 41997948 on Build GRCh38 | Deletion |
LOC390937
LOC100505585
ARHGEF1
RABAC1
ATP1A3
|
| esv2718581 | Chr.19:41894313 - 41895441 on Build GRCh38 | Deletion |
ARHGEF1
|
| nsv522854 | Chr.19:41613927 - 42426852 on Build GRCh38 | Gain |
CEACAM6
CIC
ARHGEF1
LIPE-AS1
ZNF526
ZNF574
GSK3A
CD79A
LOC390937
CEACAM5
LYPD4
RPS19
MIR4323
PRR19
ATP1A3
DEDD2
DMRTC2
LOC100505585
MIR8077
CNFN
MIR6797
RABAC1
LOC100505622
MEGF8
CEACAM7
POU2F2
PAFAH1B3
CEACAM3
LOC101930071
CEACAM4
LIPE
TMEM145
GRIK5
ERF
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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