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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:616656 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01187874_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 15 3380 NP_001165439.1
NM_021924.4 15 3398 NP_068743.2
NM_031264.3 14 2816 NP_112554.2
XM_006718253.3 15 3058 XP_006718316.1
XM_011520188.2 15 2965 XP_011518490.1
XM_011520189.2 15 2872 XP_011518491.1
XM_011520190.2 13 2631 XP_011518492.1
AA975851.1
AF258675.1 13 1967 AAG16732.1
AW137262.1 1 93
AY358368.1 15 3237 AAQ88734.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion IRF7 MIR210 LRRC56 MIR210HG SCT CDHR5 PHRF1 LOC143666 LMNTD2 RASSF7 LOC101059906 HRAS
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss IRF7 DEAF1 DRD4 SCT CDHR5 PHRF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss IRF7 ANO9 MIR210 CD151 POLR2L SLC25A22 DRD4 CDHR5 LOC143666 MUC5B LOC101059906 MIR6744 TSPAN4 RNH1 CEND1 MUC5AC PNPLA2 LOC171391 MUC6 CRACR2B RPLP2 PANO1 TMEM80 PDDC1 CHID1 LRRC56 TALDO1 PIDD1 SIGIRR SCT TOLLIP RASSF7 MUC2 EPS8L2 HRAS TOLLIP-AS1 LOC101927503 MIR210HG DEAF1 SNORA52 PHRF1 LMNTD2 AP2A2 PTDSS2
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain IRF7 MIR210 LRRC56 DRD4 SCT CDHR5 LOC143666 RASSF7 HRAS MIR210HG DEAF1 PHRF1 LMNTD2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion IRF7 ANO9 MIR210 CD151 POLR2L SLC25A22 DRD4 CDHR5 LOC143666 LOC101059906 TSPAN4 RNH1 CEND1 PKP3 PNPLA2 LOC171391 CRACR2B RPLP2 PANO1 TMEM80 PDDC1 CHID1 LRRC56 TALDO1 PIDD1 SIGIRR SCT RASSF7 EPS8L2 HRAS MIR210HG DEAF1 SNORA52 B4GALNT4 PHRF1 LMNTD2 AP2A2 PTDSS2
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain IRF7 MIR210 LRRC56 DRD4 SCT CDHR5 LOC143666 RASSF7 LOC101059906 HRAS RNH1 MIR210HG DEAF1 PHRF1 LMNTD2 PTDSS2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion IRF7 MIR210 CD151 POLR2L SLC25A22 DRD4 CDHR5 LOC143666 LOC101059906 TSPAN4 RNH1 CEND1 PNPLA2 LOC171391 CRACR2B RPLP2 PANO1 TMEM80 PDDC1 CHID1 LRRC56 TALDO1 PIDD1 SCT RASSF7 EPS8L2 HRAS MIR210HG DEAF1 SNORA52 PHRF1 LMNTD2 PTDSS2
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss IRF7 CDHR5 PHRF1
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain IRF7 MIR210 LRRC56 MIR210HG CDHR5 PHRF1 LOC143666 LMNTD2 RASSF7
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss IRF7 MIR210 LRRC56 MIR210HG CDHR5 PHRF1 LOC143666 LMNTD2 RASSF7 LOC101059906 HRAS
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain IRF7 MIR210 MIR210HG DEAF1 DRD4 SCT CDHR5 PHRF1 LOC143666 LMNTD2 RASSF7
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss IRF7 SCT CDHR5
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IRF7 ANO9 MIR210 LRRC56 IFITM5 SIGIRR CDHR5 LOC143666 RASSF7 LOC101059906 IFITM2 PGGHG HRAS RNH1 IFITM1 MIR210HG PKP3 B4GALNT4 PHRF1 LMNTD2 IFITM3 PTDSS2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss IRF7 ANO9 MIR210 CD151 POLR2L SLC25A22 DRD4 CDHR5 LOC143666 MUC5B LOC101059906 MIR6744 TSPAN4 RNH1 CEND1 MUC5AC PKP3 PNPLA2 LOC171391 MUC6 CRACR2B RPLP2 PANO1 TMEM80 PDDC1 CHID1 LRRC56 TALDO1 PIDD1 SIGIRR SCT TOLLIP RASSF7 MUC2 EPS8L2 HRAS LOC101927503 MIR210HG DEAF1 SNORA52 B4GALNT4 PHRF1 LMNTD2 AP2A2 PTDSS2
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss IRF7 CDHR5 PHRF1
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss IRF7 DEAF1 DRD4 SCT CDHR5 PHRF1
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss IRF7 MIR210 MIR210HG CDHR5 PHRF1 LOC143666 LMNTD2 RASSF7

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