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See other TRMT2A CNV Assays ›
Gene Symbol
TRMT2A
Assay Reference Genome
Location

Chr.22:20113779 on build GRCh38
Cytoband
22q11.21
Assay ID Hs01194385_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 27037

Gene Name:

 tRNA methyltransferase 2 homolog A

Gene Aliases:

 HTF9C

Location:

 Chr.22:20111866-20117305 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRMT2A NM_001257994.1 NP_001244923.1
NM_022727.5 NP_073564.3
NM_182984.4 NP_892029.2
XM_011530139.2 XP_011528441.1
XM_011530141.1 XP_011528443.1
XM_011530142.2 XP_011528444.1
XM_017028770.1 XP_016884259.1
AK025106.1 BAB15067.1
AK057029.1 BAB71349.1
BC013352.2 AAH13352.2
BC017184.2 AAH17184.2
BC108251.1 AAI08252.1
CR456354.1 CAG30240.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv726n67 Chr.22:20070444 - 20324465 on Build GRCh38 Gain MIR6816 DGCR6L MIR1286 RANBP1 MIR3618 LINC00896 DGCR8 TRMT2A LOC284865 MIR1306 LOC440792 RTN4R ZDHHC8 CCDC188
esv3647284 Chr.22:19985583 - 20137122 on Build GRCh38 Gain MIR6816 MIR3618 TANGO2 DGCR8 TRMT2A MIR1306 ZDHHC8 MIR185 ARVCF RANBP1
esv3893434 Chr.22:19470889 - 20343372 on Build GRCh38 Gain MIR6816 DGCR6L C22orf29 GNB1L MIR185 TXNRD2 RANBP1 TANGO2 TRMT2A UFD1L MIR1306 RTN4R TBX1 CDC45 CCDC188 LOC101927859 MIR4761 SEPT5 SEPT5-GP1BB CLDN5 MIR1286 MIR3618 LINC00896 DGCR8 GP1BB LOC284865 LOC440792 ZDHHC8 COMT ARVCF LINC00895
esv2758825 Chr.22:20038970 - 20321924 on Build GRCh38 Loss MIR6816 DGCR6L MIR1286 RANBP1 MIR3618 LINC00896 TANGO2 DGCR8 TRMT2A LOC284865 MIR1306 LOC440792 RTN4R ZDHHC8 CCDC188
nsv828939 Chr.22:19696032 - 20324465 on Build GRCh38 Loss MIR6816 DGCR6L C22orf29 GNB1L MIR185 TXNRD2 RANBP1 TANGO2 TRMT2A MIR1306 RTN4R TBX1 CCDC188 MIR4761 SEPT5 SEPT5-GP1BB MIR1286 MIR3618 LINC00896 DGCR8 GP1BB LOC284865 LOC440792 ZDHHC8 COMT ARVCF
nsv828938 Chr.22:19691069 - 20324465 on Build GRCh38 Gain MIR6816 DGCR6L C22orf29 GNB1L MIR185 TXNRD2 RANBP1 TANGO2 TRMT2A MIR1306 RTN4R TBX1 CCDC188 MIR4761 SEPT5 SEPT5-GP1BB MIR1286 MIR3618 LINC00896 DGCR8 GP1BB LOC284865 LOC440792 ZDHHC8 COMT ARVCF
dgv4480n100 Chr.22:20069620 - 20262667 on Build GRCh38 Gain MIR6816 MIR3618 LINC00896 DGCR8 TRMT2A LOC284865 MIR1306 RTN4R ZDHHC8 MIR1286 CCDC188 RANBP1
nsv471183 Chr.22:20018517 - 20319470 on Build GRCh38 Loss MIR6816 DGCR6L MIR185 MIR1286 RANBP1 MIR3618 LINC00896 TANGO2 DGCR8 TRMT2A LOC284865 MIR1306 LOC440792 RTN4R ZDHHC8 CCDC188
nsv953027 Chr.22:20085378 - 20303977 on Build GRCh38 Deletion MIR6816 MIR1286 RANBP1 MIR3618 LINC00896 DGCR8 TRMT2A LOC284865 MIR1306 LOC440792 RTN4R ZDHHC8 CCDC188
nsv834133 Chr.22:20029363 - 20176708 on Build GRCh38 Loss MIR6816 MIR3618 TANGO2 DGCR8 TRMT2A MIR1306 ZDHHC8 MIR185 CCDC188 RANBP1
dgv7983n54 Chr.22:19762002 - 20321870 on Build GRCh38 Gain MIR6816 DGCR6L MIR4761 C22orf29 GNB1L MIR185 TXNRD2 MIR1286 RANBP1 MIR3618 LINC00896 TANGO2 DGCR8 TRMT2A LOC284865 MIR1306 LOC440792 RTN4R ZDHHC8 TBX1 COMT ARVCF CCDC188

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

RNA methyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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