Genomic Map
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Target Gene Details
Entrez Gene ID: | 3356 |
Gene Name: | 5-hydroxytryptamine receptor 2A |
Gene Aliases: |
5-HT2A, HTR2 |
Location: |
Chr.13:46831542-46897076 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| HTR2A | NM_000621.4 | 4 | 1623 | NP_000612.1 |
| NM_001165947.2 | 3 | 883 | NP_001159419.1 | |
| A23337.1 | 3 | 1099 | CAA01675.1 | |
| AF498982.1 | 3 | 892 | AAM21129.1 | |
| AK302787.1 | 3 | 722 | ||
| AK314132.1 | 4 | 1380 | ||
| BC069356.1 | 3 | 971 | AAH69356.1 | |
| BC069576.1 | 3 | 971 | AAH69576.1 | |
| BC074848.2 | 3 | 919 | AAH74848.1 | |
| BC074849.2 | 3 | 919 | AAH74849.1 | |
| BC096839.1 | 3 | 893 | AAH96839.1 | |
| BX647777.1 | 3 | 667 | ||
| M86841.1 | 3 | 868 | AAA58354.1 | |
| S71229.1 | 3 | 942 | AAB31320.1 | |
| X57830.1 | 3 | 1037 | CAA40963.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1027 | Chr.13:46802456 - 46835423 on Build GRCh38 | Insertion |
 HTR2A
|
| esv2763019 | Chr.13:46774094 - 47549312 on Build GRCh38 | Loss |
ESD
HTR2A
HTR2A-AS1
|
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Additional Information:
For this assay, SNP(s) [rs146528709] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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