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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154507825 on build GRCh38
Cytoband
Xq28
Assay ID Hs01218646_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_011531185.2 XP_011529487.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
XM_017029702.1 XP_016885191.1
AK024601.1
AK057945.1
AK124890.1
AK294116.1
AK314682.1
AL539139.3
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss DNASE1L1 SLC10A3 CTAG1A FUNDC2 MIR3202-1 SNORA70 CTAG1B MIR3202-2 FAM223A MECP2 MIR1184-1 HCFC1-AS1 F8A1 F8A2 MIR6858 SMIM9 SNORA56 LAGE3 H2AFB1 FLNA GDI1 MTCP1 MIR718 H2AFB3 FAM3A IKBKG BRCC3 LOC107987332 FAM223B EMD HCFC1 H2AFB2 OPN1MW3 OPN1MW TMEM187 F8A3 CLIC2 FAM50A TMLHE MIR1184-3 F8 LOC105373386 CMC4 SPRY3 GAB3 TMLHE-AS1 ATP6AP1 CTAG2 TKTL1 PLXNA3 TEX28 MPP1 MIR1184-2 OPN1LW DKC1 RAB39B TAZ IRAK1 G6PD MIR664B LOC101927830 SNORA36A CH17-340M24.3 RPL10 UBL4A VBP1 OPN1MW2
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain DNASE1L1 OPN1MW3 SLC10A3 CTAG1A OPN1MW FAM50A SNORA70 LOC105373386 FAM223A MECP2 ATP6AP1 TKTL1 MIR6858 PLXNA3 LAGE3 TEX28 FLNA OPN1LW GDI1 TAZ G6PD FAM3A IKBKG LOC107987332 EMD CH17-340M24.3 RPL10 UBL4A OPN1MW2
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss DNASE1L1 SLC10A3 CTAG1A MIR3202-1 SNORA70 MIR3202-2 NAA10 FAM223A MECP2 ATP2B3 PDZD4 MAGEA1 HCFC1-AS1 LCA10 MIR6858 LOC105373383 LAGE3 FLNA DUSP9 GDI1 MIR718 ARHGAP4 TREX2 FAM3A IKBKG SRPK3 LOC107987332 EMD HCFC1 RENBP OPN1MW3 LOC107983954 ABCD1 FAM58A AVPR2 OPN1MW TMEM187 L1CAM HAUS7 FAM50A LOC105373378 LOC105373386 PNMA6A LOC105373377 ATP6AP1 TKTL1 PLXNA3 TEX28 BCAP31 ZFP92 OPN1LW PLXNB3 TAZ IRAK1 SLC6A8 G6PD IDH3G ZNF275 CH17-340M24.3 RPL10 UBL4A LOC105373381 BGN OPN1MW2 SSR4 PNCK
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion CTAG1A G6PD FAM3A IKBKG FAM223A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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