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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154507825 on build GRCh38
Cytoband
Xq28
Assay ID Hs01218646_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_011531185.2 XP_011529487.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
XM_017029702.1 XP_016885191.1
AK024601.1
AK057945.1
AK124890.1
AK294116.1
AK314682.1
AL539139.3
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss RAB39B LOC105373386 OPN1MW2 FLNA TMLHE-AS1 TAZ HCFC1 LOC101927830 OPN1LW MPP1 FAM50A CTAG1B OPN1MW DKC1 SNORA70 FAM223B UBL4A MTCP1 TEX28 SLC10A3 MIR1184-2 F8A3 H2AFB1 HCFC1-AS1 F8A2 CMC4 SPRY3 VBP1 G6PD MIR1184-1 TKTL1 IRAK1 MIR3202-1 FUNDC2 ATP6AP1 LOC107987332 F8A1 H2AFB2 CH17-340M24.3 GAB3 CTAG2 OPN1MW3 MIR664B H2AFB3 CLIC2 MIR3202-2 TMLHE MECP2 PLXNA3 FAM223A BRCC3 LAGE3 GDI1 SNORA36A MIR6858 F8 MIR718 IKBKG CTAG1A SNORA56 DNASE1L1 FAM3A MIR1184-3 SMIM9 RPL10 TMEM187 EMD
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain LOC105373386 OPN1MW2 FLNA TAZ ATP6AP1 LOC107987332 OPN1LW FAM50A CH17-340M24.3 OPN1MW OPN1MW3 SNORA70 UBL4A MECP2 PLXNA3 TEX28 FAM223A LAGE3 GDI1 MIR6858 SLC10A3 IKBKG CTAG1A DNASE1L1 FAM3A RPL10 EMD G6PD TKTL1
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss LOC105373386 OPN1MW2 AVPR2 FLNA MAGEA1 TAZ ZNF275 ZFP92 HCFC1 OPN1LW FAM50A PNMA6A OPN1MW SNORA70 LOC105373378 IDH3G UBL4A BGN TEX28 ARHGAP4 DUSP9 SLC10A3 LOC105373383 HCFC1-AS1 FAM58A LOC107983954 L1CAM G6PD TKTL1 IRAK1 HAUS7 MIR3202-1 LOC105373381 PDZD4 ATP6AP1 LOC107987332 PLXNB3 CH17-340M24.3 SRPK3 OPN1MW3 NAA10 MIR3202-2 MECP2 LCA10 PLXNA3 FAM223A BCAP31 LAGE3 GDI1 MIR6858 TREX2 MIR718 IKBKG ATP2B3 ABCD1 CTAG1A DNASE1L1 LOC105373377 FAM3A RPL10 PNCK SSR4 TMEM187 SLC6A8 EMD RENBP
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion FAM223A FAM3A IKBKG G6PD CTAG1A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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