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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54107155 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01226151_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1
BQ027375.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion VSTM1 TFPT PRPF31 NDUFA3 TARM1 OSCAR
nsv1056177 Chr.19:54073048 - 54112306 on Build GRCh38 Gain TFPT NDUFA3 TARM1 OSCAR
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss TFPT TMC4 LENG1 PRPF31 NDUFA3 CNOT3 MBOAT7
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion TFPT TMC4 LENG1 PRPF31 NDUFA3 CNOT3 TSEN34 MBOAT7 OSCAR
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion TFPT VN1R4 MIR935 MIR512-1 MIR520B MIR520D MIR520G MIR516A1 MIR519D MIR517B MIR518A1 MIR1323 CACNG7 BIRC8 MIR519A1 MIR371B LILRB5 MIR524 TMC4 MIR516B1 TPM3P9 VN1R2 MIR526B MIR519B MIR518F CACNG8 CACNG6 MIR1283-2 TSEN34 LILRB2 MIR373 MIR527 MIR1283-1 ZNF677 MIR372 NDUFA3 CNOT3 RPS9 MIR520C OSCAR MIR517A DPRX ZNF818P MYADM MIR517C PRPF31 MIR520F MIR518B LILRA6 MIR519A2 MIR515-1 ZNF665 ZNF813 MIR512-2 MIR498 MIR520H MIR516A2 ZNF765 MIR516B2 MIR519E MIR521-2 NLRP12 LOC105372457 TARM1 ZNF845 MIR518C ZNF525 MIR518D MIR518A2 LENG1 MIR515-2 MIR520A MIR523 MIR526A2 ZNF331 MIR4752 MIR518E MIR526A1 MBOAT7 MIR520E MIR522 VSTM1 MIR525 FAM90A27P MIR519C LILRA5 LILRB3 ZNF761 MIR521-1 PRKCG MIR371A LOC284379
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TFPT PRPF31 NDUFA3 TARM1 OSCAR
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss VSTM1 TFPT MIR935 PRPF31 CACNG8 CACNG6 NDUFA3 TARM1 OSCAR
esv3893246 Chr.19:54081109 - 54111207 on Build GRCh38 Gain TFPT NDUFA3 TARM1 OSCAR

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