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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54107155 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01226151_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1
BQ027375.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1056177 Chr.19:54073048 - 54112306 on Build GRCh38 Gain TARM1 TFPT NDUFA3 OSCAR
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion VSTM1 TARM1 TFPT PRPF31 NDUFA3 OSCAR
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss TMC4 TFPT PRPF31 NDUFA3 MBOAT7 LENG1 CNOT3
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion TMC4 TFPT PRPF31 NDUFA3 MBOAT7 TSEN34 LENG1 CNOT3 OSCAR
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR518E MIR517B MIR518C MIR518B BIRC8 MIR527 MBOAT7 MIR516B2 OSCAR LILRB5 MIR519A1 MIR519E MIR519C ZNF845 ZNF331 VN1R4 MIR512-2 MIR526A1 MIR520F MYADM MIR516A1 MIR520G TPM3P9 RPS9 DPRX ZNF818P NDUFA3 CACNG7 MIR520H MIR520B LENG1 MIR1283-2 CNOT3 MIR4752 VN1R2 MIR371B VSTM1 MIR498 TARM1 TFPT MIR518D CACNG8 CACNG6 MIR522 NLRP12 MIR517C PRKCG MIR373 LILRB2 MIR525 MIR526B MIR521-1 MIR521-2 MIR372 LILRA5 FAM90A27P ZNF665 MIR517A LOC105372457 MIR515-2 MIR515-1 LOC284379 MIR1283-1 MIR512-1 LILRA6 ZNF677 MIR519B PRPF31 TSEN34 MIR1323 MIR526A2 MIR520D ZNF761 MIR935 MIR520A MIR516B1 TMC4 LILRB3 MIR520C MIR518A1 MIR518F MIR519D ZNF765 MIR523 ZNF525 MIR518A2 ZNF813 MIR520E MIR519A2 MIR516A2 MIR524 MIR371A
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TARM1 TFPT PRPF31 NDUFA3 OSCAR
esv3893246 Chr.19:54081109 - 54111207 on Build GRCh38 Gain TARM1 TFPT NDUFA3 OSCAR
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss MIR935 VSTM1 TARM1 TFPT CACNG8 CACNG6 PRPF31 NDUFA3 OSCAR

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