Hs01247799_cn

• Gene Symbol: MAP1LC3C
• Assay Reference Genome Location: Chr.1:241996268 on build GRCh38
• Cytoband: 1q43

Target Gene Details

• Entrez Gene ID: 440738
• Gene Name: microtubule associated protein 1 light chain 3 gamma
• Gene Aliases: ATG8J, LC3C
• Location: Chr.1:241995194-242001393 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MAP1LC3C	NM_001004343.2	4	414	NP_001004343.1
	XM_005273139.3	5	442	XP_005273196.1
	AF276659.1	4	403	AAK35152.1
	BC127722.1	4	405
	BC132986.1	4	394
	BC132988.1	4	394
	CN260933.1	4	414

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv16e55	Chr.1:241861796 - 242169657 on Build GRCh38	Gain	MAP1LC3C EXO1 PLD5 BECN2
nsv508703	Chr.1:241983638 - 242088799 on Build GRCh38	Deletion	MAP1LC3C PLD5
nsv1002309	Chr.1:241878940 - 242132333 on Build GRCh38	Gain	MAP1LC3C EXO1 PLD5 BECN2
nsv1008886	Chr.1:241852289 - 242013681 on Build GRCh38	Gain	MAP1LC3C EXO1 BECN2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

non-motor microtubule binding protein

Gene Ontology Categories:

Process(es)

autophagosome assembly
mitophagy
cellular response to nitrogen starvation
macroautophagy

Function(s)

protein binding
microtubule binding
ubiquitin protein ligase binding