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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2040003 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01250131_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 5 711 NP_001305122.1
NM_001318194.1 6 730 NP_001305123.1
NM_002528.6 6 882 NP_002519.1
XM_017023253.1 5 970 XP_016878742.1
AB001575.1 6 846 BAA19413.1
BC000391.2 6 839 AAH00391.2
BC003014.1 6 839 AAH03014.1
BE900738.1 5 593
BG468617.1 6 656
U79718.1 6 879 AAB41534.1
U81285.1 6 844 AAC51136.1
Y09687.1 6 833 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TBL3 NHLRC4 HAGHL LOC652276 SNRNP25 MIR3177 SOX8 CASKIN1 FAM234A SLC9A3R2 SSTR5 LINC00254 RGS11 METRN MSLN TPSB2 EME2 AMDHD2 JMJD8 TSR3 HBQ1 PDIA2 MIR940 LMF1 SNORA78 LOC107984876 TMEM204 BAIAP3 MIR6511B1 HBZ RAB40C C16orf91 ZNF598 RHBDL1 E4F1 SNORA10 PRR35 MIR3176 PRSS27 MRPL28 PIGQ LOC105371047 MEIOB ABCA17P PDPK1 LMF1-AS1 DECR2 RPL23AP5 LINC00235 LOC100134368 HBA1 DDX11L10 MIR4516 HAGH NDUFB10 MIR3180-5 WASIR2 TPSG1 LOC106660606 LOC107987233 KCTD5 MAPK8IP3 HS3ST6 UBE2I MIR6767 C16orf59 POLR3K LOC105371184 RAB26 SPSB3 MSRB1 CLCN7 SNHG19 LOC105371038 METTL26 MIR6768 RNPS1 MIR5587 FAM173A HBM GFER SNORD60 C1QTNF8 FAHD1 LOC101929280 TSC2 TPSD1 LOC105371049 STUB1 MCRIP2 SSTR5-AS1 HBA2 CRAMP1 TRAF7 RPUSD1 NTHL1 NME4 ATP6V0C RHBDF1 TPSAB1 NPW MLST8 NTN3 RPS2 RAB11FIP3 BRICD5 LOC105371046 MIR662 NPRL3 PTX4 NUBP2 PKD1 SNORA64 SNHG9 ABCA3 RHOT2 MIR3178 WDR24 WFIKKN1 ERVK13-1 MRPS34 PRR25 MIR3677 TBC1D24 CEMP1 CCDC154 GNG13 NARFL RPL3L AXIN1 LOC100287175 ECI1 SYNGR3 UNKL GNPTG DNASE1L2 LUC7L PGP NME3 IGFALS CACNA1H IFT140 MIR4717 TMEM8A FBXL16 NOXO1 HN1L RNF151 PRSS29P FLJ42627 MIR1225 CHTF18 CCDC78 LOC105371045 CCNF CAPN15 ARHGDIG MPG LOC729652 WDR90 MIR6859-4 TELO2
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss TBL3 SLC9A3R2 NOXO1 NPW GFER NTHL1 ZNF598 TSC2 SYNGR3
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion TBL3 RPS2 SNORA78 LOC105371049 NOXO1 RNF151 MIR1225 MIR6511B1 MSRB1 NTHL1 MIR4516 ZNF598 NDUFB10 RPL3L SYNGR3 PKD1 SNORA64 SNORA10 SLC9A3R2 SNHG9 HS3ST6 NPW GFER TSC2
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion TBL3 RPS2 SNORA78 LOC105371049 NOXO1 RNF151 MIR1225 MIR6511B1 NTHL1 ZNF598 NDUFB10 SYNGR3 PKD1 SNORA64 SNORA10 SLC9A3R2 SNHG9 NPW GFER TSC2

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