Hs01286863_cn

• Gene Symbol: LOC101927027
• Assay Reference Genome Location: Chr.2:178436264 on build GRCh38
• Cytoband: 2q31.2

Target Gene Details

• Entrez Gene ID: 101927027
• Gene Name: uncharacterized LOC101927027
• Gene Aliases: -
• Location: Chr.2:178413659-178440243 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101927027	NR_110204.1
	AL520497.3
	BX371397.2
	BX538254.1	5	2599

Target Gene Details

• Entrez Gene ID: 8575
• Gene Name: protein activator of interferon induced protein kinase EIF2AK2
• Gene Aliases: DYT16, HSD14, PACT, RAX
• Location: Chr.2:178431414-178451240 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PRKRA	NM_001139517.1	6	946	NP_001132989.1
	NM_001139518.1	7	667	NP_001132990.1
	NM_001316362.1	8	985	NP_001303291.1
	NM_003690.4	7	866	NP_003681.1
	XM_011512063.1	7	797	XP_011510365.1
	XM_011512066.1	8	1022	XP_011510368.1
	XM_017005159.1	8	907	XP_016860648.1
	AF072860.1	7	761	AAC25672.1
	AF083033.1	7	757	AAD33099.1
	AK093360.1	3	892
	AK223107.1	7	765	BAD96827.1
	AK290601.1	7	792
	AK296019.1	8	896
	AL136615.1	7	790	CAB66550.1
	AL833867.1	6	946	CAD38725.1
	AY251164.1	7	684	AAP20061.1
	BC009470.1	7	772	AAH09470.1
	BT007243.1	7	665	AAP35907.1
	CR533525.1	7	665	CAG38556.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv625e201	Chr.2:178432240 - 178441593 on Build GRCh38	Deletion	LOC101927027 PRKRA
esv8989	Chr.2:178432002 - 178436300 on Build GRCh38	Loss	LOC101927027 PRKRA
nsv834467	Chr.2:178393413 - 178566238 on Build GRCh38	Loss	OSBPL6 DFNB59 LOC101927027 PLEKHA3 TTN-AS1 FKBP7 PRKRA TTN
esv7371	Chr.2:178436147 - 178443360 on Build GRCh38	Loss	LOC101927027 PRKRA

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

protein phosphorylation
immune response
negative regulation of cell proliferation
response to virus
production of siRNA involved in RNA interference
gene silencing by RNA
pre-miRNA processing
cellular response to oxidative stress
production of miRNAs involved in gene silencing by miRNA
outer ear morphogenesis
middle ear morphogenesis
positive regulation of catalytic activity
skeletal system morphogenesis
positive regulation of intrinsic apoptotic signaling pathway

Function(s)

double-stranded RNA binding
protein binding
enzyme activator activity
enzyme binding
identical protein binding
protein homodimerization activity
poly(A) RNA binding