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See other PNPLA2 CNV Assays ›
Gene Symbol
PNPLA2
Assay Reference Genome
Location

Chr.11:821634 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01313420_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57104

Gene Name:

 patatin like phospholipase domain containing 2

Gene Aliases:

 1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, iPLA2zeta

Location:

 Chr.11:818895-825573 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PNPLA2 NM_020376.3 NP_065109.1
XM_006718265.3 XP_006718328.1
XM_006718266.3 XP_006718329.1
XM_017018028.1 XP_016873517.1
AJ278475.1 CAC01131.1
AJ278476.1 CAC01132.1
AK308435.1
AY203925.1 1 800 AAP34448.1
AY894804.1 AAW81962.1
BC017280.2 AAH17280.1
HQ651812.1
JF279441.1
JF279442.1
KF601369.1
KF833264.1
KF833265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss POLR2L PDDC1 SNORA52 CEND1 PIDD1 PNPLA2 TSPAN4 PANO1 RPLP2 CHID1 LOC171391 SLC25A22 CD151 CRACR2B
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC6 LOC101059906 MIR210 LRRC56 SNORA52 CEND1 TOLLIP LOC101927503 PNPLA2 PHRF1 EPS8L2 TALDO1 MUC2 SLC25A22 AP2A2 CD151 HRAS LOC143666 B4GALNT4 MUC5AC POLR2L PKP3 PDDC1 RNH1 MUC5B DEAF1 SCT DRD4 ANO9 PIDD1 CDHR5 TMEM80 LMNTD2 TSPAN4 SIGIRR IRF7 PANO1 MIR6744 RPLP2 CHID1 LOC171391 MIR210HG RASSF7 PTDSS2 CRACR2B
dgv1526n54 Chr.11:812533 - 843713 on Build GRCh38 Gain POLR2L TSPAN4 RPLP2 CD151 PNPLA2 CRACR2B
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain POLR2L PDDC1 SNORA52 CEND1 PIDD1 PNPLA2 TSPAN4 PANO1 RPLP2 CHID1 LOC171391 SLC25A22 AP2A2 CD151 CRACR2B
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC6 LOC101059906 MIR210 LRRC56 SNORA52 CEND1 TOLLIP LOC101927503 PNPLA2 PHRF1 EPS8L2 TALDO1 MUC2 SLC25A22 AP2A2 CD151 HRAS TOLLIP-AS1 LOC143666 MUC5AC POLR2L PDDC1 RNH1 MUC5B DEAF1 SCT DRD4 ANO9 PIDD1 CDHR5 TMEM80 LMNTD2 TSPAN4 SIGIRR IRF7 PANO1 MIR6744 RPLP2 CHID1 LOC171391 MIR210HG RASSF7 PTDSS2 CRACR2B
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss POLR2L TSPAN4 RPLP2 CHID1 SNORA52 AP2A2 CD151 PIDD1 PNPLA2 CRACR2B
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC101059906 MIR210 LRRC56 SNORA52 CEND1 PNPLA2 PHRF1 EPS8L2 TALDO1 SLC25A22 AP2A2 CD151 HRAS LOC143666 B4GALNT4 POLR2L PKP3 PDDC1 RNH1 DEAF1 SCT DRD4 ANO9 PIDD1 CDHR5 TMEM80 LMNTD2 TSPAN4 SIGIRR IRF7 PANO1 RPLP2 CHID1 LOC171391 MIR210HG RASSF7 PTDSS2 CRACR2B
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss POLR2L PDDC1 SNORA52 CEND1 PIDD1 PNPLA2 TSPAN4 PANO1 RPLP2 CHID1 LOC171391 SLC25A22 CD151 CRACR2B
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain PANO1 PDDC1 RPLP2 LOC171391 SNORA52 CEND1 SLC25A22 CD151 PIDD1 PNPLA2 CRACR2B
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC101059906 MIR210 LRRC56 SNORA52 CEND1 PNPLA2 PHRF1 EPS8L2 TALDO1 SLC25A22 CD151 HRAS LOC143666 POLR2L PDDC1 RNH1 DEAF1 SCT DRD4 PIDD1 CDHR5 TMEM80 LMNTD2 TSPAN4 IRF7 PANO1 RPLP2 CHID1 LOC171391 MIR210HG RASSF7 PTDSS2 CRACR2B
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L TSPAN4 CHID1 CD151 PNPLA2 CRACR2B
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion POLR2L PDDC1 SNORA52 CEND1 PIDD1 PNPLA2 TALDO1 TSPAN4 PANO1 RPLP2 CHID1 LOC171391 SLC25A22 CD151 CRACR2B

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