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See other LOC100288152 CNV Assays ›
Gene Symbol
LOC100288152
Assay Reference Genome
Location

Chr.5:476035 on build GRCh38
Cytoband
5p15.33
Assay ID Hs01370280_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100288152

Gene Name:

 uncharacterized LOC100288152

Gene Aliases:

 -

Location:

 Chr.5:473236-480892 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100288152 NR_125375.1
BI222796.1

Target Gene Details

Entrez Gene ID:

 6550

Gene Name:

 solute carrier family 9 member A3

Gene Aliases:

 DIAR8, NHE-3, NHE3

Location:

 Chr.5:471986-524434 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Intron 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3 NM_001284351.2 NP_001271280.1
NM_004174.3 NP_004165.2
BC101669.1 AAI01670.1
BC101671.1 AAI01672.1
BC143328.1
U28043.1 AAB48990.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv822926 Chr.5:471229 - 543871 on Build GRCh38 Gain SLC9A3 MIR4456 LOC100288152 EXOC3 PP7080
esv3894107 Chr.5:81322 - 801057 on Build GRCh38 Gain TPPP LOC100996325 PDCD6 PLEKHG4B HRAT5 MIR4456 LOC100288152 EXOC3 LRRC14B ZDHHC11 LOC101929895 CEP72 SLC9A3 AHRR SDHA ZDHHC11B EXOC3-AS1 CCDC127 PP7080
nsv830183 Chr.5:349237 - 502409 on Build GRCh38 Gain+Loss SLC9A3 LOC100288152 AHRR EXOC3 EXOC3-AS1 PP7080
nsv596691 Chr.5:474296 - 492304 on Build GRCh38 Loss SLC9A3 LOC100288152
nsv1032584 Chr.5:375290 - 809679 on Build GRCh38 Gain TPPP LOC100996325 MIR4456 LOC100288152 EXOC3 ZDHHC11 LOC101929895 CEP72 SLC9A3 AHRR ZDHHC11B EXOC3-AS1 PP7080
nsv596626 Chr.5:429874 - 598109 on Build GRCh38 Gain SLC9A3 MIR4456 LOC100288152 AHRR EXOC3 EXOC3-AS1 PP7080
nsv596628 Chr.5:457146 - 539195 on Build GRCh38 Gain SLC9A3 MIR4456 LOC100288152 EXOC3 PP7080
nsv461890 Chr.5:438449 - 539195 on Build GRCh38 Gain SLC9A3 MIR4456 LOC100288152 EXOC3 EXOC3-AS1 PP7080
esv2759315 Chr.5:17263 - 595840 on Build GRCh38 Loss PDCD6 PLEKHG4B HRAT5 MIR4456 LOC100288152 EXOC3 LRRC14B SLC9A3 AHRR SDHA EXOC3-AS1 CCDC127 PP7080
esv3603744 Chr.5:359572 - 478120 on Build GRCh38 Gain SLC9A3 LOC100288152 AHRR EXOC3 EXOC3-AS1 PP7080
nsv521554 Chr.5:474989 - 495262 on Build GRCh38 Loss SLC9A3 LOC100288152
nsv4674 Chr.5:454921 - 488099 on Build GRCh38 Insertion SLC9A3 LOC100288152 EXOC3 PP7080
esv2752071 Chr.5:378298 - 699075 on Build GRCh38 Gain TPPP SLC9A3 LOC100996325 MIR4456 LOC100288152 AHRR EXOC3 EXOC3-AS1 LOC101929895 PP7080 CEP72
nsv1019215 Chr.5:346521 - 661696 on Build GRCh38 Gain TPPP SLC9A3 LOC100996325 MIR4456 LOC100288152 AHRR EXOC3 EXOC3-AS1 PP7080 CEP72
nsv1027279 Chr.5:337575 - 531110 on Build GRCh38 Gain SLC9A3 LOC100288152 AHRR EXOC3 EXOC3-AS1 PP7080
dgv9493n54 Chr.5:474507 - 487159 on Build GRCh38 Loss SLC9A3 LOC100288152

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