Hs01376571_cn

• Gene Symbol: SLC22A6
• Assay Reference Genome Location: Chr.11:62983557 on build GRCh38
• Cytoband: 11q12.3

Target Gene Details

• Entrez Gene ID: 9356
• Gene Name: solute carrier family 22 member 6
• Gene Aliases: HOAT1, OAT1, PAHT, ROAT1
• Location: Chr.11:62976597-62985023 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC22A6	NM_004790.4			NP_004781.2
	NM_153276.2			NP_695008.1
	NM_153277.2			NP_695009.1
	NM_153278.2			NP_695010.1
	XM_017018562.1			XP_016874051.1
	AB009697.1			BAA75072.1
	AB009698.1			BAA75073.1
	AF057039.2			AAC70004.1
	AF097490.1			AAD19356.1
	AF104038.1			AAD10052.1
	AF124373.1			AAD55356.1
	AJ251529.1			CAB94830.1
	AJ271205.1			CAB97249.1
	AK055764.1
	AK091879.1
	AK298374.1
	BC033682.1			AAH33682.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv34011	Chr.11:62885307 - 63226230 on Build GRCh38	Loss	SLC22A24 SLC3A2 SLC22A25 SLC22A6 SLC22A8 CHRM1
dgv204e214	Chr.11:62950243 - 63024049 on Build GRCh38	Gain	SLC22A6 SLC22A8

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

secondary carrier transporter

Gene Ontology Categories:

Process(es)

inorganic anion transport
organic anion transport
alpha-ketoglutarate transport
response to methotrexate
sodium-independent organic anion transport
protein homooligomerization
renal tubular secretion
anion transmembrane transport

Function(s)

inorganic anion exchanger activity
protein binding
organic anion transmembrane transporter activity
anion:anion antiporter activity
sodium-independent organic anion transmembrane transporter activity
chloride ion binding
protein homodimerization activity